Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1902 ATGGACAAGCCACCTAATAATGTTGACAACAGTGATGCTGATTCTGTCATTTGCAGCCTCCAAGAGCCCTGTGCTAATGGCTGTGCTAGTGTTAGTCTATGTAGTAGCAGTGTTTCCGCATCTGACAACAGTGTGAGTAGTAGCAAGATGAGCATTAGCAATGTTGAGCCTGACAAGAGCACTGATGAAAGTTACAAGAGTAGCTCCAGCTGTGTAAGTAATTCTAACGCTTATGATGCTCATGGGGCTAGTTTTAGGAGCTTTTGCCCTTCCAAACCTCACAAGGGCAATGATATTAGATGGGATGCTATACAATGCGTGAAAGCTAAAAACGGGGATTTGGGTTTGGGGCAGTTTAGACTCCTGAAGAAGCTTGGTTTTGGGGACATTGGGAGTGTATATTTGGCCGAGCTTAGAGGGATGGGTTGCCTCTTCGCAATGAAGGTAATGGATAAAGGCATGTTGGCTGGAAGAAAGAAATTGGCTAGAACTCAGACAGAGAGAGACATTTTGGGTTTGTTGGACCATCCTTTCCTTCCGACGCTTTATTCCCATTTCGAAACTGAGAAATTTTCTTGCTTGCTTATGGAGTTTTGCAGTGGTGGGGATCTTCATGCGCTCCGACAACGGCAGCCGGGCAAGCATTTTACAGAGCAAGCTGCCAGGTTTTATGCTTCTGAAGTGCTTCTAGCTCTCGAGTATCTTCACATGATGGGAGTGATATATAGAGACTTGAAGCCAGAAAATGTACTGGTGCGAGAGGATGGGCATATCATGCTCTCTGATTTTGATTTGTCGTTAAGATGTTGTGTGAGTCCCACCCTTGTTCAGTCCAACAAAGAACCATCTTGTCAGATATCTTCCTACTGTATCCAGCCATCAATATGCATTGATCCAGCAGGAAAACTTCCAGTTTGTGTGGAGCCTTCATGCTTGCAGCCCTCTTGTTTCACGCCCCATGTTTTCAACTCCAAAAAGGGCAAAGCAAAAAGCGTTAGATTAAGCTTGGCAAACTCAGATTCATACCCTATGCTTATTGCTGAGCCAACTAATGCCCGCTCTATGTCATTTGTTGGGACTCATGAATATCTAGCCCCTGAGATCATAAGAGGTGATGGCCATGGAAGTGCTGTGGATTGGTGGACATTTGGTATTTTCTTCTACGAGTTATTGAATGGGAAGACGCCATTTAAAGGCAATGGAAACCGAGAGACCCTATTCAATGTTGTGGGTCAGCCTCTGAAATTTCCCGAAGGATCAAACACCAGTTTTGCGGCAAAGGATTTGATAAGGGGATTGCTTGTGAAAGACCCACAAAAGAGGTTAGGATTCAAAAGAGGTGCCACGGAGATCAAACAGCATCCTTTCTTTGAAAGTGTTAATTGGGCTCTCATCCGCAGTAACCAGCCCCCAGAGATTCCAAGACCAGTTGATCTTGCATTGTTGAATCAGACATTGAAGTCGTCAGTGCCTCCAAATGACAAAGGTGCCACTGATTCAGACAGTTACAGTTCATCAGGTCCTTACCTGGATTTTGAATTTTTTTAG 1548 0.4451 MDKPPNNVDNSDADSVICSLQEPCANGCASVSLCSSSVSASDNSVSSSKMSISNVEPDKSTDESYKSSSSCVSNSNAYDAHGASFRSFCPSKPHKGNDIRWDAIQCVKAKNGDLGLGQFRLLKKLGFGDIGSVYLAELRGMGCLFAMKVMDKGMLAGRKKLARTQTERDILGLLDHPFLPTLYSHFETEKFSCLLMEFCSGGDLHALRQRQPGKHFTEQAARFYASEVLLALEYLHMMGVIYRDLKPENVLVREDGHIMLSDFDLSLRCCVSPTLVQSNKEPSCQISSYCIQPSICIDPAGKLPVCVEPSCLQPSCFTPHVFNSKKGKAKSVRLSLANSDSYPMLIAEPTNARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFFYELLNGKTPFKGNGNRETLFNVVGQPLKFPEGSNTSFAAKDLIRGLLVKDPQKRLGFKRGATEIKQHPFFESVNWALIRSNQPPEIPRPVDLALLNQTLKSSVPPNDKGATDSDSYSSSGPYLDFEFF 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1902 515 Gene3D Transferase(Phosphotransferase) domain 1 351 474 - -
Glsi11g1902 515 MobiDBLite consensus disorder prediction 488 507 - -
Glsi11g1902 515 CDD STKc_phototropin_like 118 480 - -
Glsi11g1902 515 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
Glsi11g1902 515 Gene3D Phosphorylase Kinase; domain 1 118 198 - -
Glsi11g1902 515 SMART serkin_6 119 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g1902 515 Gene3D Transferase(Phosphotransferase) domain 1 199 268 - -
Glsi11g1902 515 MobiDBLite consensus disorder prediction 38 66 - -
Glsi11g1902 515 FunFam Serine/threonine-protein kinase D6PK-like 117 202 - -
Glsi11g1902 515 FunFam serine/threonine-protein kinase D6PK-like 203 270 - -
Glsi11g1902 515 SUPERFAMILY Protein kinase-like (PK-like) 95 483 IPR011009 -
Glsi11g1902 515 PANTHER FLIPPASE KINASE 1-RELATED 39 479 - -
Glsi11g1902 515 ProSiteProfiles Protein kinase domain profile. 119 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g1902 515 FunFam serine/threonine-protein kinase D6PK-like 352 475 - -
Glsi11g1902 515 Pfam Protein kinase domain 354 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g1902 515 Pfam Protein kinase domain 120 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1902 Glsi-ChrGlsi11 11919424 11921496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1902 29 515 AGC Kinase Gene Family AT5G40030 74.029 0.0 717
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Glsi11g1902 Pkinase 3.7e-36 CL0016