Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1879 ATGAATCCAAATGAGACCTTATTCTCTTCAGTTAAGCAACTTGATGCATCCTTTAATAATACAAGATATGATGTTTGCATTAATGTTCCTCCCCATATCGTTTCTGATGGGATATGGGGAAGTCACGTCAATGCCGGGTCGCCAATGAGGTCTTCATACCCTGTGTTTGAGTTGCAGGTGATTCTAATATTTGCAGTCACTCAAACAAGTCATTTCTTCCTCAAGCGCCTGGGGTTTCCTCTCTTCTTTTCACAAATGGTGGCTGGCCTAATTCTGGGACCATCACTTCACTTTGAGGCATTGAACAAGTACAAAAAAATGTTGTTTCCTTATGGTAGTCAGGACACTCTTGCAACAATATCATCCCTTGGTTACGCATTGTTCATCTTTCTATATGGAGTGCAAATGGATTACAGTATGATACTAAGAACTGGAAAAAAATCATGGGTCATTGCCTTTATAGGATTGATTATACCTGTTTCGCTTGGATTTATTTTTATGTCTCTATTAACACAGCCACTAACTGCTGCTTTAGGAGACTATTACAAAACCATACCTGTTATCTTCATTTCACATAGCATAACATCATTTGCAGTCATTGCTGCCTTACTCAATGATCTCCGAATCCTGAATTCAGAACTTGGCAGACTGGCATTATCCTCAGCGCTGGTGAGTGACATACTGAGCTCAGGTTTTACAACTATTGCCACTGCCGTAGTAAGCGGTGGTCATGACTACAAAAAGATATATATCAACTTGGCATCGTTGTTTTCCTTTACCATCTTGATTCCATTGATCTGTCGTCCAGCAATGCTTTGGATAGTAAAACGCACACCAGAAGGCAGACCTGTGAAGCAAGTTTACATTTATAACATCATTGCATTGGTCTTTGCCTTATCTTGGCTTTCAACAAAGTCAAATCAATCCTTTACTTTTGGAGCTTTCGTCTTGGGCTTGGCTGTGCCAGAAGGACCCCCATTAGGATCTGCATTGGTTTCCCAGCTTGAATTATTTGGAAAATCATTCCTTTTACCCATCTTTGTGACTACCTGTATGATGAAGGCTGATCTTTCATTGCAGCAGACATCAACATCAGTTATGGTTATTGCTACATGTGTGCTTGTAGTCCATCTTGTCAAAATAGCTGCGTGCATGGCACCTTCACTCTATTGCAAGATGCCCATTAAAGATGCTCTGTCTCTTGCCCTCATTATGAATTGCAAAGGCGTGGTGGATGTAGGCATGTACAATTCCGTATTTGACAGAAATCAACTTCACGCCCAAACTTATGGAGTGATGATGATCAGTGTAATGATCGTAGCTACCGTAGTGCAAATTTCTGTGAAATATTTGTATGATCCTTCAAGAAAATATGCTGGCTACCAGAAAAGGAACATCATGAATTTGAAACCAAACGCAGAGCTTCGAATACTCGCCTGCATTCACAAACAACACCACTTAACTGGTATCACCAATTTCCTCGATCTCTGTTATCCAACAGAAGACAATCCTATCATCGTGGATGCCCTGCATCTAATCGAGCTACTTGGGCGCTCTTCACCCATATTTATCTGCCATCGTCTTCAAAGAGATGCAGACTTAGGCTTGCAGAACTCATACTCTGAGAATGTGTTCATTTGTTTTCAAAATTATGAACATGGGAAGAACCCAGGTGCTGCATCAACAAACACTTACACAGCCATATCTCCACCTAGCCTAATGTATGAAGACGTTTGTTACCTTGCACTGGACAAACTTGCATCAATTGTAGTACTTCCATTCCATCGAAGATGGTCCATTGATGGCTTCATTGAGTCGGAAGACAAGAACATCAGGTCTCTAAATTGTAGGGTCCTGGAAAGGGCTCCCTGCTCGGTTGGAATCCTTGTGAACCGTGCCTCCCATCAAAGTGAACCAAATTCACCATTGCGGTTAGCTGTTGTCTTTTTCGGAGGGAAAGATGATCGAGAGGCTTTGTGCTTAGCCAAACGAGCAACAAGGGACCCTAACACTAAACTAGTTGTGTACCATCTTCCTGTCAAGGACAACTTGAGAACATCTACCATGGAAAATATGCTTGATTATGCGGTGCTCAAAGATGTTGTGGAAGCAAATTCTGCTTCACGTGTTAGTTACAGACAAATTTTAGCAGAGGGCGGATCAGATATAGCTTCTATTCTTCGTGCTATGGTGGGTGAGCATGACTTTTTTATAGTTGGGAGACGCCATGACACGGAAACACCTCTAACATCTGGACTTAAAGATTGGTGTGAGTACGAAGAGTTAGGTGTCATTGGAGATTTGCTTGCCTCACCAGATTTGGAGAGCAGAGCATCTGTTCTGGTGGTGCAACAGCAACAAATGTTCAAGTAA 2373 0.418 MNPNETLFSSVKQLDASFNNTRYDVCINVPPHIVSDGIWGSHVNAGSPMRSSYPVFELQVILIFAVTQTSHFFLKRLGFPLFFSQMVAGLILGPSLHFEALNKYKKMLFPYGSQDTLATISSLGYALFIFLYGVQMDYSMILRTGKKSWVIAFIGLIIPVSLGFIFMSLLTQPLTAALGDYYKTIPVIFISHSITSFAVIAALLNDLRILNSELGRLALSSALVSDILSSGFTTIATAVVSGGHDYKKIYINLASLFSFTILIPLICRPAMLWIVKRTPEGRPVKQVYIYNIIALVFALSWLSTKSNQSFTFGAFVLGLAVPEGPPLGSALVSQLELFGKSFLLPIFVTTCMMKADLSLQQTSTSVMVIATCVLVVHLVKIAACMAPSLYCKMPIKDALSLALIMNCKGVVDVGMYNSVFDRNQLHAQTYGVMMISVMIVATVVQISVKYLYDPSRKYAGYQKRNIMNLKPNAELRILACIHKQHHLTGITNFLDLCYPTEDNPIIVDALHLIELLGRSSPIFICHRLQRDADLGLQNSYSENVFICFQNYEHGKNPGAASTNTYTAISPPSLMYEDVCYLALDKLASIVVLPFHRRWSIDGFIESEDKNIRSLNCRVLERAPCSVGILVNRASHQSEPNSPLRLAVVFFGGKDDREALCLAKRATRDPNTKLVVYHLPVKDNLRTSTMENMLDYAVLKDVVEANSASRVSYRQILAEGGSDIASILRAMVGEHDFFIVGRRHDTETPLTSGLKDWCEYEELGVIGDLLASPDLESRASVLVVQQQQMFK 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1879 790 Gene3D - 56 459 IPR038770 -
Glsi11g1879 790 PANTHER CATION/H + ANTIPORTER 33 787 - -
Glsi11g1879 790 Pfam Sodium/hydrogen exchanger family 61 445 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1879 Glsi-ChrGlsi11 11759213 11761773 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1879 19 787 Antiporter Super Family AT2G28180 35.920 1.30e-161 487