Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1876 ATGGCAGGTGGAACCGAAGCTTTCCCAGATATGGGAAAACATTGCCAATACCTTGATTGCAGCCAACTCGATTTTCTTCCTTTCACATGCGACGGTTGCAGAAAGGTGTTCTGTCTGGAACATAGATCTTCCAAGTCCCACGATTCCACCAAATCAGACCATAACTGCAGGAAGGTTGTGGGGTGCGAAACATGTTTGATGTCAATGGAGACCACCGGTCACCATGGAGAGGAGGAGAAGGCTATATTGGAGAAGTATCACAAGACTGGAGATTGTGACCCCAAGAAGAAAAAGAAACCCACTTGTCCTGCTGCAAGGAGGTGCAAGGAGGTTCTAACGTTTTCTAATACCAGTAGTTGTAAAACTTGCCAGCTGAAGGTGTGCCTCAAGTATCATTTCCCAGCCGACCATGCTTTCGCTGTTGCTGCTCTAATCTCCTCCAAAGTAATAGTCCGCGTGGGATTGAAGCATGGGTTACCTTGGGCTCGAAAGACGGGGAGATTACGGTGGCGTCTGAGATTGAAAGGGAACGTAAAGGAGGGAATGCCAACGGCAAAGGAGGAAACTTGCGAAGCCATTGCCGACGATTTCTGCAACAAACAAGAGCCCAACCAAAGCAGGTCCAAATTATCCCAAGATTTCCTCGGGCAACGATGGATTTTATCCACCATAATAATAAACCAAACAAGAAACGTGGCTTTTACTGTAAAAACGACTCTCCCGTCCAAGAATTGTCCCATTGGATTTGCCTCCGGCTGCGAGAAGGGCAAACCTTTGGCTTCAGTGGGGAAGCATTTAATTAAGAGCCAGCAGGCACTTGAGCTGGTGTTCTTCAAGTCCACCGAGACACAGAGTGAGCTTCCTCTTCTTTACCAGTGA 879 0.4767 MAGGTEAFPDMGKHCQYLDCSQLDFLPFTCDGCRKVFCLEHRSSKSHDSTKSDHNCRKVVGCETCLMSMETTGHHGEEEKAILEKYHKTGDCDPKKKKKPTCPAARRCKEVLTFSNTSSCKTCQLKVCLKYHFPADHAFAVAALISSKVIVRVGLKHGLPWARKTGRLRWRLRLKGNVKEGMPTAKEETCEAIADDFCNKQEPNQSRSKLSQDFLGQRWILSTIIINQTRNVAFTVKTTLPSKNCPIGFASGCEKGKPLASVGKHLIKSQQALELVFFKSTETQSELPLLYQ 292
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1876 292 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 7 199 - -
Glsi11g1876 292 SMART AN1_Zf_4 15 61 IPR000058 GO:0008270
Glsi11g1876 292 Pfam AN1-like Zinc finger 15 48 IPR000058 GO:0008270
Glsi11g1876 292 Gene3D - 2 66 IPR035896 -
Glsi11g1876 292 ProSiteProfiles Zinc finger AN1-type profile. 9 57 IPR000058 GO:0008270
Glsi11g1876 292 SUPERFAMILY AN1-like Zinc finger 8 48 IPR035896 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi11g1876 Glsi-ChrGlsi11 11741297 11747162 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1876 2 138 C2H2 Transcription Factor Family AT3G28210 62.774 1.91e-57 181