Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1867 ATGAACTACAAAAATCAAAATAGGAATAGTCCTTCGGCATTTTCAGTCCATACTTGCATCACCACGTTCGCCCTACCTTTGGAATTACGTGCCAAGCTTCCGCTATATTTAGATTCACCCAGGAAATTGCCGTTTCAACAAGGGGCTCGGGCGAAAGAAAATGAAACTAGTGCCCTCAAGCGTTATGATTGCCACTGTGATTTAAAGAGCTTTTGGAGTTTTATGCATATACCAGACTTTAGATGGGGATGGGTGCCTCCTCCTGACGTAAGACCTTGCACCCCACAATCCCACACGCCAACGGTGGCTACTGGCAAACTCTGCCCACTCTTTCCGCCGAACTATATCTATTGGGCAACCTCGCAGAAACAGGCAATGTCACCAGGCTATGCGATTGAGCTTTACTTCGACCCCGCGCTTGAAAACCAGGTCTTGAAGGCCTGGAATGTACTGGCTCGCCGACAAATCAGTACCCAACTGATCGAAATTGAGTCACGCCCACACATCACTCTTTTCTCCAGCCCATTCGTTGATCCTGCGAAGCTTGAATCCATTGTGAAGAGTTTCACCGCCAAGCTAGAACCTTTGCCTCTAACTTTCTCTTCAATTGGGAGCCTGCCAAATGACAACAATGTCCTCTTTCTTGCACCGACGCCTTCAATCTTGCTACTTCAGTTTCAATCGCAATTGTGTGATGCAATGAAGAAAGAAGGCATCGAGATAGGAGAGGAGTATCGCCCCGATTCTTGGGTTCCTTATTGTTCTGTTGCGCAGGAAGTGCCAAAAACCAGGATGGCCGAGGCATTTTGTGTCTTGCGGGACTTGAAATTGCCGGTGTCTGGATATGCTATGGATATTGGGCTGGTGGAGTTCTCACCCGTTCGCGAGCTCTTCTCATTTGTGCTTGGCAACATAGTAGAAGCATAA 927 0.4768 MNYKNQNRNSPSAFSVHTCITTFALPLELRAKLPLYLDSPRKLPFQQGARAKENETSALKRYDCHCDLKSFWSFMHIPDFRWGWVPPPDVRPCTPQSHTPTVATGKLCPLFPPNYIYWATSQKQAMSPGYAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFVDPAKLESIVKSFTAKLEPLPLTFSSIGSLPNDNNVLFLAPTPSILLLQFQSQLCDAMKKEGIEIGEEYRPDSWVPYCSVAQEVPKTRMAEAFCVLRDLKLPVSGYAMDIGLVEFSPVRELFSFVLGNIVEA 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1867 308 SUPERFAMILY LigT-like 129 281 IPR009097 -
Glsi11g1867 308 Pfam 2'-5' RNA ligase superfamily 166 281 - -
Glsi11g1867 308 Gene3D Cyclic phosphodiesterase 130 303 - -
Glsi11g1867 308 PANTHER - 126 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1867 Glsi-ChrGlsi11 11692977 11694373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1867 126 308 Calmodulin-binding Proteins AT5G40190 72.678 1.51e-91 268