Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1863 ATGGCGGGGAGGTATTGTTACAAGGACACAATTCCATTTTGTGCAATGGTTGCAGTGGAGTGCACCAACGTTGTTGTTAACGTTCTGTTCAAAGCAGCCACTCTGAGAGGGCTTAGTTACTACGTCTTCATCGTCTATTCCTTCGCTGTTTCCACTCTTGTTCTTCTTCTACCTCTGCCCTTCATCTTCCGCTGGTCAAGAGGGCTTCCTTCATTCAAGCTGTCTCTGCTATTCAAAATTTTCCTCCTCGGAGGTTTAGGGTTTGTAGCTCAGCTTTGCGGATATAAAGGAATTCAGTATAGTTCACCTACTCTTGCTTCTGCTCTCAGCAACGTAATCCCTGCCTTTACCTTCTTACTTGCCGTCTTCTTCAGGTTGGAAAAGGTAGCATTAAGAAGCTCGAGCACTCAGGCCAAAATCGTAGGTTCAATACTATCAATAGCAGGTGCACTCACAGTAGTTCTCTACAGGGGCCCTGTAATCTTATCTGCTTCTTCTCCATCACAATCTCCTCCATTAAATGCTCCACTAGACTCATCATCACAAAGGAAATGGGTTCTTGGTGGCTTCCTACTCGCTGTTGAGTTTCTTCTAGCTTCAGTCTGGTACATTGTTCAGACCCATGTTATTAAACTATATCCAGCAGAGATACCCGTGGTCTTTTTGTACAACCTTTGCGGGACTCTCGTATCTGCACCAGTATGTTTAATAGCAGAAGCGAACTTGAGTGCTTGGAAGCTAAATCCTGATATAACATTGGTCGCCATTATATACTCAGGATTTTTTTGCACAGGCTTAAGCGCTCTGGTTCACACATGGCTTCTCCATCTGAAAGGCCCTGTGTATGTATCGATCTTCAAGCCCCTGTCAATCGCCATTGCTGCTGCTATGAGTGTCATTTTCCTTGGCGATGCTCTGCATCTGGGGTGTGTTTTTGGGGCAGTAATACTGTCAGTTGGGTTTTATGCTGTTATATGGGGGAAAGCAAAAGAAGAAGAAGAAGAATTGAACGAGAACTATGGGCTAGGTAGCTCGAGACCCCCATCCACTAGCAAGACTCCTTTGTTGCAGGGCTAA 1077 0.4513 MAGRYCYKDTIPFCAMVAVECTNVVVNVLFKAATLRGLSYYVFIVYSFAVSTLVLLLPLPFIFRWSRGLPSFKLSLLFKIFLLGGLGFVAQLCGYKGIQYSSPTLASALSNVIPAFTFLLAVFFRLEKVALRSSSTQAKIVGSILSIAGALTVVLYRGPVILSASSPSQSPPLNAPLDSSSQRKWVLGGFLLAVEFLLASVWYIVQTHVIKLYPAEIPVVFLYNLCGTLVSAPVCLIAEANLSAWKLNPDITLVAIIYSGFFCTGLSALVHTWLLHLKGPVYVSIFKPLSIAIAAAMSVIFLGDALHLGCVFGAVILSVGFYAVIWGKAKEEEEELNENYGLGSSRPPSTSKTPLLQG 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1863 358 PANTHER WAT1-RELATED PROTEIN 12 335 IPR030184 GO:0016020|GO:0022857
Glsi11g1863 358 Pfam EamA-like transporter family 27 154 IPR000620 GO:0016020
Glsi11g1863 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 330 - -
Glsi11g1863 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
Glsi11g1863 358 MobiDBLite consensus disorder prediction 342 358 - -
Glsi11g1863 358 MobiDBLite consensus disorder prediction 337 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1863 Glsi-ChrGlsi11 11663974 11665841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1863 1 332 Nodulin-like Gene Family AT5G40240 62.687 2.23e-142 406