Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1842 ATGGAAAAAGAAACCTATAAATTGATTGGCATTGGTTCTTCAAATACGTACTATGCAGCTTATGGATCCCATGAGTTTACCTGGTTGGGTGTTTGGTTTTGGGCTTGGCAAGCTCGCTCAAGCAAGTTAGGGCCACGAATGGTTCAAACAGTTACATCTATGCTTACTCAATTTTTTTTTTTTGGTGAGAGAAAGTTTAGATCTACAATTGAACCAAAAACCCTAGCCAGAGTCCTGCTTGGGAAGGTTGCTGTCAAAGGGGTCCGAATTGCCTTTTTGGTATTAGGGCCTCCAGTGTCTCTGTGTAACTGGGCTGAGTCCCATTTGTGTTTTAGGCCCCGGCCTACCTTTATATTATTAGTACCACTACCACAGCTAGACGGGAATGCTATATACATGGTCTTCCGCTGTGATGCTACTCTACAAGGGCTAAATTGTAGTATAGGGACAATCGAGAGGCGAACAATATTATTCTTGAATCTTGAGGTAGGCAGTGGAATTGGTCCTAGGTGTATTGTTCATGTGATTAAAGATGGATTTAATATGTACTACAAAAGAAACTATTCCCATGGACTAACTCCGATGCAACTTGCCTGTAAAAAGTGTGGAAAAGGAAACAGAAAGATTCAACTCAAAGCAATTCTGGCCATTCCTTCCTACGATATAAAAAGTCGCGTTGGTCCTCCCATTGACCCCAAGTTTCTTGAGTTGAGTTCCTTTAGAATTATAGAGGGAACAAGTGTGCAGCATGCATGCTTCAGGCAATTCAATGAAATTGAAAAGGAGCACCTTGTGGAGCACATGAGGCTCTCAAATCATTCGGTTCACGATCCAACCTGTGCCATTTTCAGCAAACACTGCAGGTCATTTAAGTCTCTACGGGAACATCTTATAGGTTTATTGCCAAAACAAGAATGCAGAGATATTTTTGTGAACCAGGGATGCAAGTTTTGCTTCAAACTCCTTGATAGCCCTGACGCTTGCAAGCTCCACCAGGAAACATGTCAACTCTCGGGGATAAATCATGCAGGACTGATTTCTAGGTTTTCAAACTTGGGCATTCGTGATAATTTGAGTATTGGTGATGGAGGGCCACAAGTGGTTGCACTTGATTGTACACTGGTTGGCGGTGCCATTCGACCAGAAAACCTAAGGGACGCAATACCAATCCAGCAAGTGCAGAGAAAAATTCAAGAATTCCTCTGCAATGGGGTACCCATGTGGAAGATTAGACCAAGATCAGGTGGAAAAGCCAGAATTCTTGTGGGCCATGGTTTAGATCATGACCTTGACTGCTTGCAATTATACTATCCAAAAGGAATGCTCAGGTATGACATTCGAACTGGAGTACGTGATCCTTATGAGAATTGTCTTTCCACAATGAGGCTGTACATGACAATGAGATCCCAAGTACACAAAATTGAGGATTACCCTTTGGCTTCTGACCTAGAAAACAGGTACAACTTTGATTTGAGGAGGCTAAATGAACTTAAGAGAATGACCCCGGAACAAATGTTGGAAATCTCAAGGTCTGACTGCTACTGCTGGTGTTTGGATTCCATGTAG 1566 0.4253 MEKETYKLIGIGSSNTYYAAYGSHEFTWLGVWFWAWQARSSKLGPRMVQTVTSMLTQFFFFGERKFRSTIEPKTLARVLLGKVAVKGVRIAFLVLGPPVSLCNWAESHLCFRPRPTFILLVPLPQLDGNAIYMVFRCDATLQGLNCSIGTIERRTILFLNLEVGSGIGPRCIVHVIKDGFNMYYKRNYSHGLTPMQLACKKCGKGNRKIQLKAILAIPSYDIKSRVGPPIDPKFLELSSFRIIEGTSVQHACFRQFNEIEKEHLVEHMRLSNHSVHDPTCAIFSKHCRSFKSLREHLIGLLPKQECRDIFVNQGCKFCFKLLDSPDACKLHQETCQLSGINHAGLISRFSNLGIRDNLSIGDGGPQVVALDCTLVGGAIRPENLRDAIPIQQVQRKIQEFLCNGVPMWKIRPRSGGKARILVGHGLDHDLDCLQLYYPKGMLRYDIRTGVRDPYENCLSTMRLYMTMRSQVHKIEDYPLASDLENRYNFDLRRLNELKRMTPEQMLEISRSDCYCWCLDSM 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1842 521 Gene3D - 366 443 IPR036397 GO:0003676
Glsi11g1842 521 SUPERFAMILY Ribonuclease H-like 379 463 IPR012337 -
Glsi11g1842 521 Coils Coil 480 500 - -
Glsi11g1842 521 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 379 439 IPR047021 GO:0004527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1842 Glsi-ChrGlsi11 11526932 11531948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1842 251 521 C2H2 Transcription Factor Family AT3G27970 51.170 6.18e-113 337