Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1834 ATGCCTCGACAACCCAAAAGGAGGATACATTTTAGTAAACTATATTCATTTTCGTGCATAAAATCTTCTTTTGGACATGATCATTCTCAAATTGGGCAGAGAGGGTACTCAAGGGTCGTCTACTGCAACGATCCTGATGATCCAGAAGCTATTCAGCTGAATTACAGAGGCAATTATGTCTCAACGACCAAATATACGGCTTTTAATTTTGTTCCCAAGTCTTTATTTGAACAGTTTAGGAGGGTTGCAAATATCTACTTTCTTATCGTTGCGTGTCTTTCGTTTAGTCCGTTGGCACCTTATACACCTCTGAGTATTGTTGCACCGTTGCTAGTCGTGATAGGAGCTACTATGGCCAAGGAAGCTGTGGAAGATTGGACGAGGAGAAAACAGGATATAGAGGCAAACAACCGAAAGGTTAAGGTGTACAGTAGAGATTATACATTTGTGGAGACCAGATGGAAGAAACTCTGTGTGGGCGATCTCATTAAAGTGTACAAGGATGAATACTTTCCTGCTGATCTTCTTCTACTTTCATCCAATTCTGAGGATGGAGTTTGCTATGTTGAGACAATGAATCTTGACGGAGAAACTAATCTAAAATTAAAGCATGCTTTGGACGTGACAGCTCATCTTCAAGATGAAAAATCCCTTCAAAAGTTTAGGGCAGTGGTCAAATGTGAGGATCCTAATGAAAATCTATACTCATTTGTTGGAACCTTGCACTATGAGGGTAAAGAATATCCACTTTCCTTACAGCAGATTCTTTTAAGAGATTCTAAGCTGAAAAACACTGAATATGTCTATGCTGTTGTTATCTTTACTGGCCATGATACAAAAGTGATGCAGAATGCCACTGATCCTCCATCCAAGAGAAGCAAAATTGAGAGAAAAATGGATAAAATAATATACATCCTCTTCAGTACCTTGATCTTAATATCCTTTATTGGCTCAGTGTTTTTTGGCATTGAGACTAAAAAGGATATCCGTTCGGGCAGGTATAGAAGATGGTACCTTCGTCCAGACAATACAACAGTATTTTATGATTCTAGGAGGGCAACACTTGCTGCTATTCTTCATTTTTTAACTGCCCTTATGTTGTATGGATATCTAATTCCGATATCACTATATGTCTCCATAGAAATTGTGAAAGTTTTGCAGAGTATTTTCATCAACCAAGATCTGGAAATGTATTATGAAGAAACTGATAGACCAGCTCATGCACGCACGTCTAATTTGAATGAGGAACTTGGTCAGGTTGATACTATCTTGTCTGACAAAACAGGTACTTTGACTTGTAACTCTATGGAATTTGTGAAATGTTCCATAGCAGGCACTCCATATGGACGTGGTTTGACAGAAGTAGAGAGGGCACTTGCAAGGAGAAGAGGAAATGAGGAACCACAAATGGATGGTCAATCATCTGATTTACAGGACCAAAATAGTGATGCAGTGGACTCCAGGCAGTCAATTAAGGGTTTCAACTTTAGAGATGAACGGATAATGAATGGGAAATGGGTTAATGAACCTCATTCGGACATCATTCAAAAATTCTTTCGAGTTTTAGCAATATGTCATACAGCCATTCCTGATCAAGATGAAGAATCAGGAGAAATTTCCTATGAAGCTGAGTCACCAGATGAAGCAGCTTTTGTCATAGCTGCAAGGGAACTTGGTTTTGAGCTTTTCACAAGGACACAAACAAGCATATTGTTACATGAATTAGATTATTCTAGCAGAAAAAAGGTTGACAGAGCATATGAGCTTCTGCATGTCTTAGAGTTCACCAGTTCCCGCAAAAGAATGTCAGTGATTGTAAGGAATGAGGAAAATCAACTATTGCTCCTAAGCAAGGGTGCAGACAGCGTTATGTTTGAAAGGCTTTCACAAGATGGAAGACAGTTTGAGGCTGAGACCAAAGATCATATCAAAAGATATGCTGAGGCAGGTTTAAGAACTCTGGTAATCACATACCGTGAACTTGGTGAAGAAGAATATAAGTTGTGGGAAAAAGAGTTCTTAAAAGCCAAAACTTCTGTAGCTGCAGACCGTGACGTATTGGTGGAAGCGGCTGCTGATAAGATGGAAAGAGATTTGATTCTTCTTGGTGCAACAGCAGTTGAGGACAGACTGCAAAAGGGGGTTCCTGAATGTATTGATAAGCTTGCCCAGGCAGGAATAAAATTATGGGTATTAACTGGGGACAAGATGGAAACTGCAGTCAACATAGGGTATGCTTGTAGTTTACTTAGGCAAGACATGACACAAATAGTGATAACTCTTGATTCACCAGATATCCTATCCTTGGAAAAACAGAGGGATAAGGAGGCTCTACCAAAGGCCTCTCTTGAAAGCATCAAGAAGCAAATCAATGAGGGAATCTCACAAATCAAGTCTGCAAAAGAGGGTTCTAATACAGCGAAAGAAAGTTCTGCTGAATTTGCCTTGATAATTGATGGGAAGTCCTTGGATTATTCTCTTAAGCAGAATTTGGAGAGGTCCTTTTTTGAGCTGGCAGTTAATTGTGCTTCTGTTATATGTTGCCGATCTTCACCCAAACAGAAAGCTCGTGTTACAAGATTGGTGAAATTGGGAACAGGGAAGACAACACTGTCAATTGGTGATGGAGCAAACGATGTTGGCATGCTTCAGGAGGCTGATATTGGAGTTGGTATTAGTGGTGCTGAAGGGATGCAGGCTGTGATGGCAAGTGATTTTGCCGTAGGTCAATTTCGTTTTCTGGAGCGTTTGTTGTTGGTACATGGCCACTGGTGTTATAGAAGAATAGCAATGATGATATGCTATTTTTTCTATAAGAACATTGCATTTGGATTTACTCTATTTTGGTTTGAGGCGTATGCTTCATTTTCTGGTCAACCTGCATACAACGATTGGTACATGTCATTTTTCAATGTCTTCTTCACTTCACTTCCTGTAATTGCTCTGGGTGTTTTTGATCAGGATGTTTCTGCCCGACTTTGCCTGAAGTATGCATTCTTATATCTAGAGGGAGTAGAGGACATCCTCTTCAGCTGGCCCCGGATTCTTGGCTGGATGCTTAACGGAGTCATTAGTTCCTTGATCATCTTCTTCTTGACCACCAACTCTGTCTTAAATCAGGCCTTCAGAAGAGATGGTCAGGTGGTTGATTTGGAAGTACTTGGGGTGACAATGTATACCTGTGTGGTGTGGACTGTGAATTGCCAAATGGCACTATCCGTAAACTACTTCACTTGGATCCAACATTTTTTCATCTGGGGCAGCATTGCCTTCTGGTATGTATTCTTGTTGATTTATGGTTATCTCTCCCCAACCATATCCACAACAGCCTATAAGGTTCTTGTAGAAGCATGCGCTCCCAGTGGTCTCTATTGGCTAGTTACCCTTTTAGTTGTTGTGTGCGCTCTTCTGCCCTATTTCTCCTATAGGGCTTTCCAGACTCGATTCCGACCCATGTACCATGATATTATTCAGAAAAAACGAGTAGAAGGATCTGAAACCGAGATATCTGAAGAGTTGCCTAAAAGTGTCAGGGGCAAACTAACCCATCTGAGAGAAAAATTGAAGCAAAGGGATTTGTGA 3582 0.4048 MPRQPKRRIHFSKLYSFSCIKSSFGHDHSQIGQRGYSRVVYCNDPDDPEAIQLNYRGNYVSTTKYTAFNFVPKSLFEQFRRVANIYFLIVACLSFSPLAPYTPLSIVAPLLVVIGATMAKEAVEDWTRRKQDIEANNRKVKVYSRDYTFVETRWKKLCVGDLIKVYKDEYFPADLLLLSSNSEDGVCYVETMNLDGETNLKLKHALDVTAHLQDEKSLQKFRAVVKCEDPNENLYSFVGTLHYEGKEYPLSLQQILLRDSKLKNTEYVYAVVIFTGHDTKVMQNATDPPSKRSKIERKMDKIIYILFSTLILISFIGSVFFGIETKKDIRSGRYRRWYLRPDNTTVFYDSRRATLAAILHFLTALMLYGYLIPISLYVSIEIVKVLQSIFINQDLEMYYEETDRPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSIAGTPYGRGLTEVERALARRRGNEEPQMDGQSSDLQDQNSDAVDSRQSIKGFNFRDERIMNGKWVNEPHSDIIQKFFRVLAICHTAIPDQDEESGEISYEAESPDEAAFVIAARELGFELFTRTQTSILLHELDYSSRKKVDRAYELLHVLEFTSSRKRMSVIVRNEENQLLLLSKGADSVMFERLSQDGRQFEAETKDHIKRYAEAGLRTLVITYRELGEEEYKLWEKEFLKAKTSVAADRDVLVEAAADKMERDLILLGATAVEDRLQKGVPECIDKLAQAGIKLWVLTGDKMETAVNIGYACSLLRQDMTQIVITLDSPDILSLEKQRDKEALPKASLESIKKQINEGISQIKSAKEGSNTAKESSAEFALIIDGKSLDYSLKQNLERSFFELAVNCASVICCRSSPKQKARVTRLVKLGTGKTTLSIGDGANDVGMLQEADIGVGISGAEGMQAVMASDFAVGQFRFLERLLLVHGHWCYRRIAMMICYFFYKNIAFGFTLFWFEAYASFSGQPAYNDWYMSFFNVFFTSLPVIALGVFDQDVSARLCLKYAFLYLEGVEDILFSWPRILGWMLNGVISSLIIFFLTTNSVLNQAFRRDGQVVDLEVLGVTMYTCVVWTVNCQMALSVNYFTWIQHFFIWGSIAFWYVFLLIYGYLSPTISTTAYKVLVEACAPSGLYWLVTLLVVVCALLPYFSYRAFQTRFRPMYHDIIQKKRVEGSETEISEELPKSVRGKLTHLREKLKQRDL 1193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1834 1193 MobiDBLite consensus disorder prediction 463 484 - -
Glsi11g1834 1193 NCBIfam HAD-IC family P-type ATPase 844 955 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Glsi11g1834 1193 Pfam Phospholipid-translocating P-type ATPase C-terminal 901 1151 IPR032630 -
Glsi11g1834 1193 FunFam Phospholipid-transporting ATPase 701 913 - -
Glsi11g1834 1193 SUPERFAMILY Calcium ATPase, transmembrane domain M 46 1151 IPR023298 -
Glsi11g1834 1193 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Glsi11g1834 1193 SUPERFAMILY HAD-like 419 928 IPR036412 -
Glsi11g1834 1193 FunFam Phospholipid-transporting ATPase 116 286 - -
Glsi11g1834 1193 Gene3D - 543 702 IPR023299 GO:0000166
Glsi11g1834 1193 Gene3D - 111 287 - -
Glsi11g1834 1193 SFLD p-type atpase 406 924 IPR044492 -
Glsi11g1834 1193 PRINTS P-type cation-transporting ATPase superfamily signature 873 892 - -
Glsi11g1834 1193 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Glsi11g1834 1193 FunFam Phospholipid-transporting ATPase 544 702 - -
Glsi11g1834 1193 MobiDBLite consensus disorder prediction 470 484 - -
Glsi11g1834 1193 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 39 1162 - -
Glsi11g1834 1193 Pfam E1-E2 ATPase 136 345 - -
Glsi11g1834 1193 Pfam Cation transport ATPase (P-type) 525 629 - -
Glsi11g1834 1193 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 501 661 IPR023299 GO:0000166
Glsi11g1834 1193 Gene3D - 703 913 IPR023214 -
Glsi11g1834 1193 Pfam Phospholipid-translocating ATPase N-terminal 40 105 IPR032631 -
Glsi11g1834 1193 SFLD C1.7: P-type atpase like 406 924 - -
Glsi11g1834 1193 Coils Coil 116 136 - -
Glsi11g1834 1193 CDD P-type_ATPase_APLT_Dnf-like 57 1033 - -
Glsi11g1834 1193 NCBIfam phospholipid-translocating P-type ATPase 55 1159 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Glsi11g1834 1193 SUPERFAMILY Calcium ATPase, transduction domain A 142 285 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1834 Glsi-ChrGlsi11 11480168 11487213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1834 9 1164 Primary Pumps ATPases AT1G68710 64.751 0.0 1614