Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1832 ATGGAACATGTATCAGAAAAAAGATTTCCTCTGAATGCCAAAGATTACAAGTTATATGAAGAAGTTGGTGAAGGTGTTAGCGCCACTGTGTACAGGGCTCTCTGTATTCCACTGAATGAGAAAGTTGCAATCAAGGTTCTCGATTTAGAAAAGTGCAATAATGATCTGGATGGCATCCGGAGAGAGGTACAGACAATGAGCTTGACTGATCATCCAAATGTTTTACAAGCTCATTGTTCTTTCACTACTGGACACAACCTCTGGGTTGTGATGCCATACATGGCTGGGGGATCCTGCCTTCATATAATGAAATCTTCCTATCCTGAGGGTTTTGAAGAGCTTGTTATTGCTACTTTGCTGCGAGAGGTTCTCAAAGCTCTTGTCTATCTTCATGCCCATGGGCACATACATAGAGATGTTAAGGCTGGGAATATTTTGATTGATTCTAATGGTGCAGTCAAATTAGCTGACTTTGGAGTGTCTGCATGTATGTTTGATGCTGGAGATAGGCAACGTTCAAGAAACACTTTTGTTGGAACTCCTTGCTGGATGGCTCCTGAAGTTATGCAGCAATTACATGGATATGATTTTAAAGCAGACATATGGTCATTTGGCATAACAGCACTTGAACTTGCTCATGGTCATGCCCCATTTTCCAAGTATCCACCAATGAAAGTTTTGCTTATGACTTTACAAAACGCCCCTCCAGGTCTTGATTATGAAAGAGACAAGAGATTTTCAAAGTCTTTCAAAGACATGGTTGCCACCTGCTTAGTGAAGGACCCAAAGAAACGTCCAAGTTCAGAAAAGCTTTTAAAGCATCACTTCTTTAAACATGCACGCTCCAGTGACTACCTATCTCATGCAATTTTAGATGGCCTTGCTCCACTAGGGGATCGTTTTAGGATGCTGAAGGCAAAAGAGGCAGATTTATTAGTGCAGAACAAGGCTCTTTATGAGGATAAGGATCAATTATCACAGAAAGAATATATTCGAGGAATTAGTGCTTGGAATTTCAACCTTGAGGATTTAAAAAGTCAAGCTGCTCTTATTCAAGATGATGGCATGTCGAATGCAGAAGAGCCAGATATGGGTAAGAAGCAAACGGATAGGTTTGATGATGTTAGGATTCCTGCAGAGGGGCTATCTGCTATAGCAGCTAATCATTCAGATGCTGCACCCACACTGGACAAGGAGGATGGGTTCAATGATCTTCAAGATTTGGAGAGTTCACTTGGTTCATTTCCTATTAAACCTCTTGAAGCACTCAAAGGTTGTTTTGATGTTGGTGAGGACCATGTCAATAATACTACTTCTAGAGAGTTGGATGAGGATAATGCAAGAAATGAGAATGACATTTCTGGGCCTAGCAGTTCGTTGCCACCAAATGCTATAACTGAGAATAAGTTGAGTGGTCCTCTGCTGCCTGATAGTTTTTTCTCTCCTAAAAAAGTCGTTAATGATGGGGACAGGGATTATTTGCAATCGAAATTTTACTCTGAGCGGAATAGTGGTCCATTGCCATATTGGCAAAAGAGAGACACCAACAACCTTTCATCTGTTGATGATGCATCGGAAGGAGCAGTTGTCCGGCGCAAGGGGCGGTTCAAGGTCACATTAGCAGATGTCAGTCCCAAGGGTCATCTGAACTACACTTTTGGCCATGCTAGTGGAGGTTCTTCCAGTCCACCAAATCAGAACCTTACATCTGCCTCTATTCTTCCATCACTGCAGTTCATTTTGCAACAGAACAGTTCACAAAGGGAAGAAATTATTAAATTAATAAAGTACGCAGAGCAATCTTGTGGCAGGAATATAGAATCAGTAGAGTCAGGGATAATTGATCTTTTGCAGGTACCACCTCCAACGAGCAGGGAGAGAGAACTGCATTCTCAGGTGATCCAACTCCAACAGAGCATTGGAAGCATTGTTGAGGAATTGCAAAGACAAAAAATGAAAAATTCCCAGTTAGAGAAACAGCTAAACTCAACGGTGAATCAAGCGAAGCGTGATGTTGAGTGA 2022 0.4169 MEHVSEKRFPLNAKDYKLYEEVGEGVSATVYRALCIPLNEKVAIKVLDLEKCNNDLDGIRREVQTMSLTDHPNVLQAHCSFTTGHNLWVVMPYMAGGSCLHIMKSSYPEGFEELVIATLLREVLKALVYLHAHGHIHRDVKAGNILIDSNGAVKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKDMVATCLVKDPKKRPSSEKLLKHHFFKHARSSDYLSHAILDGLAPLGDRFRMLKAKEADLLVQNKALYEDKDQLSQKEYIRGISAWNFNLEDLKSQAALIQDDGMSNAEEPDMGKKQTDRFDDVRIPAEGLSAIAANHSDAAPTLDKEDGFNDLQDLESSLGSFPIKPLEALKGCFDVGEDHVNNTTSRELDEDNARNENDISGPSSSLPPNAITENKLSGPLLPDSFFSPKKVVNDGDRDYLQSKFYSERNSGPLPYWQKRDTNNLSSVDDASEGAVVRRKGRFKVTLADVSPKGHLNYTFGHASGGSSSPPNQNLTSASILPSLQFILQQNSSQREEIIKLIKYAEQSCGRNIESVESGIIDLLQVPPPTSRERELHSQVIQLQQSIGSIVEELQRQKMKNSQLEKQLNSTVNQAKRDVE 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1832 673 Gene3D Transferase(Phosphotransferase) domain 1 97 297 - -
Glsi11g1832 673 MobiDBLite consensus disorder prediction 653 673 - -
Glsi11g1832 673 MobiDBLite consensus disorder prediction 437 468 - -
Glsi11g1832 673 MobiDBLite consensus disorder prediction 451 466 - -
Glsi11g1832 673 FunFam serine/threonine-protein kinase BLUS1 isoform X1 97 330 - -
Glsi11g1832 673 FunFam Serine/threonine-protein kinase BLUS1 5 93 - -
Glsi11g1832 673 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 6 651 IPR047173 GO:0043539
Glsi11g1832 673 Coils Coil 640 667 - -
Glsi11g1832 673 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g1832 673 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g1832 673 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g1832 673 Gene3D Phosphorylase Kinase; domain 1 5 92 - -
Glsi11g1832 673 SUPERFAMILY Protein kinase-like (PK-like) 13 278 IPR011009 -
Glsi11g1832 673 CDD STKc_OSR1_SPAK 14 277 - -
Glsi11g1832 673 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1832 Glsi-ChrGlsi11 11463801 11473374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1832 1 667 MAP Kinase Kinase Kinase Kinase AT5G14720 68.659 0.0 944
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Glsi11g1832 Pkinase 4e-59 CL0016