Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1818 ATGGAATACATGAGGAGTAGAGCAAGTATTGCATGTGCTAGAGGTTATGAGGTTCAGACCCCAAGAATTGCAGAGGCCATTTTGTCTGAGTGTATGCCGCTTAAATTTCAGAATCAGATAATTATGTGCTTCCTTTCGTTGAGCGAAGATCATATATATATATATACACACATGGCCTCTTCAAGCTACTCCAATTCTCCTTGTGCTGCCTGCAAGTTTCTGAGAAGGAAATGTATGCCGGATTGCATTTTCGCCCCATATTTCCCGCCAGAAGAACCTCAAAAATTTGCAAATGTTCATAAAATATTTGGTGCAAGCAACGTGAGTAAACTCCTGAATGAAGTCCTACCCCATCAAAGAGAGGATGCGGTGAACTCTCTGGCTTATGAAGCCGAAGCACGGATAAAAGATCCAGTTTATGGCTGCGTCGGGGCCATATCCGTCCTGCAGAGGCAAGTCATGAGGCTCCAAAAGGAGCTAGATGCCACAAATGCAGATTTGATTCGCTACACCTGCAATGATATGCCATTGCCAACTCAAGATGGAATGAGAAGTATGGGTGAGGGAGGAGCAGCTGGTTCGTCTCTTGCTCAATCTGCAGCTGGTTTTTATTATCCATCTCCTTGGAATAATGATTCTTGTGGAGATGGCTATCACAGATCAGGAGGAGATAATAGCATGTGA 684 0.4401 MEYMRSRASIACARGYEVQTPRIAEAILSECMPLKFQNQIIMCFLSLSEDHIYIYTHMASSSYSNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVLPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVMRLQKELDATNADLIRYTCNDMPLPTQDGMRSMGEGGAAGSSLAQSAAGFYYPSPWNNDSCGDGYHRSGGDNSM 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1818 227 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 65 173 - -
Glsi11g1818 227 Coils Coil 146 166 - -
Glsi11g1818 227 ProSiteProfiles LOB domain profile. 66 167 IPR004883 -
Glsi11g1818 227 Pfam Lateral organ boundaries (LOB) domain 67 163 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1818 Glsi-ChrGlsi11 11341169 11345590 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1818 58 224 AS2 family AT5G63090 59.204 2.20e-69 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi11g1818 LOB 3.3e-42 No_clan