Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1806 ATGGATCATAGATTGAGAGAGATGAATGATTCTGGGAAAGTGGCTGCATTAAGTGATAGCGCCAAGGACCAGCTTTCGCTCCAATGCAATGGCTCCAAGGCCCCATCTGTCCCCAAGCAACCCTTCTTCATTGGTGTTGCTGGTGGAACTGCATCTGGGAAAACAACTGTGTGCAATAGGATAAATTCTCAGCTTCATGATCAGCGCATTATCCTTATTAATCAAGATTCTTTTTACTACTCTTTGAATGACAAGATGTTGCAGAAAGTTAATGAGTACAACTTCGACCATCCTGATGCATTCAATACAGAGCTTATGCTCTCATGTGTGGAGAAATTAAAACGAGGACAGACTGTTAGCATACCAAATTATGATATTAAAAGTAATAAGAGCACTGAAGCAGCACGTCAGGTCCATCCTGCAGATGTCATAGTTTTAGAAGGGATACTAGTTCTTCATGATTCTCGTGTCCGTGATCTATTGAACATGAAGATCTTTGTTGATGAAGAATCTGATGTACGCCTTACACGGAGGATTCAACGTGACACTATTGAACATGGGAGGAACATTCAGAATGTTTTAGACCAACCAACCAAAAAATTTGCTGATATCATCATTCCCGGTGGAAAAGATAATGATGTCGCCATTGACTTGATAGTGCAAAATATGCGTATGAAGCTTGGCCAGCATGATCTCTGTAAAATATATCCAAATATTTTTGCTATATTTCCAACATTTCAGACAAAGGGAATGCATACCCTTATACGTGATGTCAGAACAACAAAGCATGACTTCATCTTTTATTCAGACCGGCTTATTCGGCTGGTTGTGGAGCATGGACTAGGTCACCTCCCTTTTACTGAAAAGCAGATCATAACACCAACAGGATCTGTATACGCCGGGGTAGCTTTCTCTAGAAGGTTGTGCGGAGTTTCTGTCATTAGAAGGGAATCAAAATTGGCAAAATCCTTATTCATGGAGAGGGCACAAACGGCAGACAGGTTGGTGGAGGCCACTGCATTGTCCCCCATCCATCTTCCTCTTCCTGCTGCAGTAGTTATCTCATATTCCCACAATCTGTTGCAGCTAATATATGAGAAGCTACCATCAGACATTGCAAGCCGGCATGTGTTTCTGCTTGATCCAGTTCTGGCCACAGGAAATTCTGCGGTCAAAGCTATATCTCTGCTCCTCAATAAGGGTGTACCCGAAGCCAACATAATCTTTCTAAACTTAATAGCAGTGAGTCATTTGATCTGCTGCTTCCTTTTCTTTGCAAGTGCTTGTGCATTTTGGATCCACTGTGCTATGTATGAATTAAACTACAAAATGCAGGCACCCGAGGGAATCCATGTGGTGTGTAAGAGATTTCCTAGGATGAAACTTGTGACATCAGAAATTGATGCAACACTAAATGAGGATTTACGTGTGATCCCAGGCCTGGGGGAGTTTGGGGATCGTTACTTTGGCACTGATTCTTGA 1482 0.4217 MDHRLREMNDSGKVAALSDSAKDQLSLQCNGSKAPSVPKQPFFIGVAGGTASGKTTVCNRINSQLHDQRIILINQDSFYYSLNDKMLQKVNEYNFDHPDAFNTELMLSCVEKLKRGQTVSIPNYDIKSNKSTEAARQVHPADVIVLEGILVLHDSRVRDLLNMKIFVDEESDVRLTRRIQRDTIEHGRNIQNVLDQPTKKFADIIIPGGKDNDVAIDLIVQNMRMKLGQHDLCKIYPNIFAIFPTFQTKGMHTLIRDVRTTKHDFIFYSDRLIRLVVEHGLGHLPFTEKQIITPTGSVYAGVAFSRRLCGVSVIRRESKLAKSLFMERAQTADRLVEATALSPIHLPLPAAVVISYSHNLLQLIYEKLPSDIASRHVFLLDPVLATGNSAVKAISLLLNKGVPEANIIFLNLIAVSHLICCFLFFASACAFWIHCAMYELNYKMQAPEGIHVVCKRFPRMKLVTSEIDATLNEDLRVIPGLGEFGDRYFGTDS 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1806 493 FunFam Uridine kinase 38 229 - -
Glsi11g1806 493 PRINTS Uridine kinase signature 71 82 - -
Glsi11g1806 493 PRINTS Uridine kinase signature 186 197 - -
Glsi11g1806 493 PRINTS Uridine kinase signature 41 58 - -
Glsi11g1806 493 PRINTS Uridine kinase signature 116 131 - -
Glsi11g1806 493 PRINTS Uridine kinase signature 172 182 - -
Glsi11g1806 493 SUPERFAMILY PRTase-like 241 490 IPR029057 -
Glsi11g1806 493 Pfam Phosphoribulokinase / Uridine kinase family 43 217 IPR006083 GO:0005524|GO:0016301
Glsi11g1806 493 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 219 IPR027417 -
Glsi11g1806 493 CDD PRTases_typeI 338 419 IPR000836 -
Glsi11g1806 493 Gene3D - 37 229 IPR027417 -
Glsi11g1806 493 PANTHER URIDINE KINASE 33 323 - -
Glsi11g1806 493 Gene3D - 444 491 IPR029057 -
Glsi11g1806 493 Gene3D - 230 420 IPR029057 -
Glsi11g1806 493 CDD UMPK 43 224 IPR000764 -
Glsi11g1806 493 Pfam Uracil phosphoribosyltransferase 244 416 - -
Glsi11g1806 493 Pfam Uracil phosphoribosyltransferase 444 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1806 Glsi-ChrGlsi11 11271114 11275932 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1806 26 492 PRT Gene Family AT4G26510 58.212 0.0 551