LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi11g1784	ATGTGGAGCAACAACAGTCCTCCTCCTTCGCCGCATGCCGAACCCACAGATTCTCTTAGCCCGAGTCTTGGACCACCGTCATTCCGTAGAAAGAGAACCAAAACCAGAAAGCCCAAGTTCCTCAGTCTCCGCCATCAACTCACTCCCCAACTTGTCAAACGCCCTCTATCTTACTACCACCCACCGGACCTCCACGACGACCACAGCGTCGCTTTCCTCTTCAGCTCCGACGGCGGCGCCACCTCCACTCTCAACGGCCTTCTACAGGACGACTCTTTCTCGCCACCCTCGTTGACGTGGCCTACGTTGGACGGCGATAATGGGAGCTCGCTGCTGCGGAAGGCGATGAGGAGGAGCAAGGAGGAGAGTGAGGGAAGCGAGGAGATGTGGCTGTGTTACTCGGATGTGACTAGTTACTGTAGCAGCAGCAGTGCGATTGTGAAGGAGGAGGCACGTGATTGTGATGGGAGGGACATGAGCTGTGCGACGACGTTTAGCTGCTTGTCCTTGAAGCTGGATTACCGCGGGATACTGAGTGCTTGGTCTGATAAAGGCTCTCCTTACGTGGCTCTACAGACCCCGCAGCACCTCCCACCCTTACTTCATCACGTCCTTCCCGCCAATTCTCCCAAAGTGTCATCAGATGGCAACGAGAATAGAGTTGTGGAGAATGCATGGGAAGTCGTAGAAAATGAAGGAAAAATGGAAGTGAAGGATAAGAAATTAGGGGAAAGAGAGGCAAGTTTGCTGAGATACAAGGAGAAGAAGCAACACAGGCGCTTTGCAAAGTGTGTCCGCTATGAAGTCCGCAAGCTCAATGCTGATAAGCGCCCTCGGGTGAAGGGAAGATTTGTGAAGGAGGCCAGAGAAGTAGTCTTTTATGATACGCAAAGTGGAAAATGTCACTGTGCTGAAATGATGAAGAATGAAATTTCTAATGCCCAGTTAAGCGTTACAGCTTAG	963	0.5192	MWSNNSPPPSPHAEPTDSLSPSLGPPSFRRKRTKTRKPKFLSLRHQLTPQLVKRPLSYYHPPDLHDDHSVAFLFSSDGGATSTLNGLLQDDSFSPPSLTWPTLDGDNGSSLLRKAMRRSKEESEGSEEMWLCYSDVTSYCSSSSAIVKEEARDCDGRDMSCATTFSCLSLKLDYRGILSAWSDKGSPYVALQTPQHLPPLLHHVLPANSPKVSSDGNENRVVENAWEVVENEGKMEVKDKKLGEREASLLRYKEKKQHRRFAKCVRYEVRKLNADKRPRVKGRFVKEAREVVFYDTQSGKCHCAEMMKNEISNAQLSVTA	320

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi11g1784	320	MobiDBLite	consensus disorder prediction	1	39	-	-
	Glsi11g1784	320	ProSiteProfiles	CCT domain profile.	245	287	IPR010402	GO:0005515
	Glsi11g1784	320	PANTHER	CCT MOTIF FAMILY PROTEIN, EXPRESSED	17	288	-	-
	Glsi11g1784	320	Pfam	CCT motif	245	287	IPR010402	GO:0005515

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi11g1784	Glsi-ChrGlsi11	11166100	11168445	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi11g1784	168	286	C2C2-CO-like Transcription Factor Family	AT1G73870	43.443	5.73e-21	90.5

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	Others	Glsi11g1784		CCT	6.9e-18	CL0281