Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1760 ATGAGTACTGTGTGGACTGAGATGGCTGGAGGTATTATTCAGCAGTTTTTGAGGAGGAAACTCCAGTCTCAATCTTCTGCCCATTCCTTTATGTCGTCTATCATCACAAAGAAAGATGATGCCAGCTCTACTGGGAGCAGGTCCTTAAGAGCACTTGCATTGATTGGAGCTGGCATCTCAGGATTTTTGAGTTTTGCAACAACTGCATCGGCTGATGAGGCGGAGCATGGCCTTGAATGTCCAAGCTATCCATGGCCTCACAAGGGCATCCTTAGTTCATATGATCATGCTTCGATTCGTCGTGGTCATCAAGTATATCAAGAAGTCTGTGCATCTTGTCATTCTATGTCTTTGATATCGTACCGTGATTTGGTTGGAGTTGCTTATACGGAAGAAGAGGTAAAGGCTATGGCAGCTGAGATTGAGGTGGTTGATGGCCCTAATGATGAGGGTGAGATGTTTACACGCCCTGGTAAACTCAGCGATCGCTTTCCTCAGCCATATGCAAATGAAGCGGCTGCTAGGTTTGCTAATGGAGGAGCTTATCCCCCAGATCTAAGTCTTATTACCAAAGCCCGTCACAATGGTCAAAACTATGTATTTTCCCTTCTAACTGGTTATCATGATCCCCCTGCTGGTGTTTCGATCAGAGAGGGACTCCATTATAATCCTTATTTTCCTGGAGGAGCAATTGCCATGCCTAAAATGCTTAATGACGGTGCTGTTGAATATGAGGATGGTACCCCTGCTACAGAAGCTCAGATGGGAAAAGACGTTGTGACATTCTTAACTTGGGCTGCGGAACCTGAGATGGAAGAGAGAAAACTGATGGGATTTAAATGGATATTTGTATTATCTCTGGCTCTACTTCAAGCTGCATATTTCCGTCGGTTGAGGTGGTCCGTTCTAAAGTCTCGCAAACTGGTTCTTGATGTTGTCAACTAG 945 0.4497 MSTVWTEMAGGIIQQFLRRKLQSQSSAHSFMSSIITKKDDASSTGSRSLRALALIGAGISGFLSFATTASADEAEHGLECPSYPWPHKGILSSYDHASIRRGHQVYQEVCASCHSMSLISYRDLVGVAYTEEEVKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYANEAAARFANGGAYPPDLSLITKARHNGQNYVFSLLTGYHDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATEAQMGKDVVTFLTWAAEPEMEERKLMGFKWIFVLSLALLQAAYFRRLRWSVLKSRKLVLDVVN 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1760 314 PANTHER CYTOCHROME C1 35 312 IPR002326 GO:0009055|GO:0020037
Glsi11g1760 314 Gene3D - 74 269 IPR036909 GO:0009055|GO:0020037
Glsi11g1760 314 Gene3D - 270 313 - -
Glsi11g1760 314 PRINTS Cytochrome C1 signature 219 230 IPR002326 GO:0009055|GO:0020037
Glsi11g1760 314 PRINTS Cytochrome C1 signature 230 249 IPR002326 GO:0009055|GO:0020037
Glsi11g1760 314 PRINTS Cytochrome C1 signature 250 269 IPR002326 GO:0009055|GO:0020037
Glsi11g1760 314 PRINTS Cytochrome C1 signature 148 168 IPR002326 GO:0009055|GO:0020037
Glsi11g1760 314 PRINTS Cytochrome C1 signature 181 205 IPR002326 GO:0009055|GO:0020037
Glsi11g1760 314 PRINTS Cytochrome C1 signature 83 102 IPR002326 GO:0009055|GO:0020037
Glsi11g1760 314 PRINTS Cytochrome C1 signature 269 284 IPR002326 GO:0009055|GO:0020037
Glsi11g1760 314 PRINTS Cytochrome C1 signature 103 122 IPR002326 GO:0009055|GO:0020037
Glsi11g1760 314 SUPERFAMILY Cytochrome c 78 268 IPR036909 GO:0009055|GO:0020037
Glsi11g1760 314 FunFam Cytochrome c1, heme protein 74 269 - -
Glsi11g1760 314 FunFam Cytochrome c1, heme protein, mitochondrial 270 314 - -
Glsi11g1760 314 ProSiteProfiles Cytochrome c family profile. 97 204 IPR009056 GO:0009055|GO:0020037
Glsi11g1760 314 Pfam Cytochrome C1 family 85 301 IPR002326 GO:0009055|GO:0020037
Glsi11g1760 314 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 269 313 IPR021157 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1760 Glsi-ChrGlsi11 11003823 11010183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1760 8 314 Chloroplast and Mitochondria Gene Families AT3G27240 84.790 0.0 503