Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1752 ATGCTCCACGCTGGTTCAATGAGAAATTTTCACCTTTATCTTGTGGTTCTTTCCTGGTTTTTGTCCATCCCAACTACTCATGAACTACAGGCTGCTCATACCCAAGTCTTGTTACAGTTAAGGAAGTATCTGGAGAATCCTTCCTCGTTGGAAATTTGGGAAAATTATAATGGAGACCTCTGTAACATATCTCCATCTGCACGTATGAGCATTAAATGTCGGGACAATTCTGTAACTGAGCTTAAAATTATGGGAGATAAACCTGTAAAGGTTAACCAGTTCAATGGATTAGCAATTCCCAATCAAACACTGTCCGAGAGCTTCTCTACTGATTCTTTTGTCACCACATTGACCAGGTTAACCAGCCTAAGGGTTCTTAGCTTGGTGTCCTTGGGAATTTGGGGGCCACTTCCCGATAAGATTCATCGATTATCTTTACTGGAAATTTTGGACTTGAGCTCAAATTTCTTGTACGGTTCAATCCCACCAAAAATATCTACAATGGTAAAGCTTCATACATTAACACTTAATGGCAATTATTTTAATAGCACTATGCCTGATTGGTTTGATTCATTATCTAATCTACATGTTTTGAGTATGAAGAACAACCGCTTAAAGGGTGCATTCCCCACCTCACTATGCAAGATTAAGATGCTTACAGATATTTCTTTGTCTCACAATCACTTGTCTGGTGGACTGCCGGATCTGAGTACTCTCACTGGCCTACATGTATTAAATTTAGGAGAAAATCAGTTAGACTCTGAACTACCATTGATGCCCAAAGCAGTAGTTACAGTTCTGCTAAGTAAAAATTCATTCTCCGGCAAGATACCCAAGCAGTTTGGTGAATTGGATCAGCTTCAACATCTTGACCTTTCTTCAAATCATCTGAGTGGGATACCCCCATTCACCTTGTTCTCTTTGCCAAACATCAGTTATATGAATTTGGCAAGCAATATTCTGAGCGGGTCCCTTCCAAACCACCTAACTTGTGGCAGCAAACTTGGCTTTGTGGATATTTCTAGTAACAAGTTAATGCGTCGACTTCCTTCTTGCTTGGCAAGTACGTCTGATACAAGAGTCGTCAAATATCGTGGAAATTGTTTGACGGTGGATTCTCAACATCAAAAGCGAGGGTCTTATTGTAAAGAACCCATCACGGGAGAGAAGAAATTCAGGTCACAGAAAATAGCTGCAGTTGTGGCCATCATTATTGGACTTGTTCTCGTTCTTGTGCTTTTCGTGTTTGGAGTTTTCTTATGTAAAAGATATCATTTGAGAAAGATGTGTCGGCAGCACGTATTGCCAAGGAATGTGCGAGCTAATTCCTCAACAGGGGTTTCCTCTGAACTCCTAGCAAGTGCCAGATTCATTTCTCAAGCAGGGAAGCTTGGGACACAAGCTAGTCCAGTCTGTCGACTGTTTACAATTGAAGAGTTGAAGGAAGCCACAAAAAATTTTGATAAGTCAACTTATATTGGTGAAGGCTCCATAGGGAAGTCTACCGCTACATTTCAGCTGTACAAAGGTAAACTGGATAATGGATCCTATGTGGCAATACGATCTTTGGATTTGTCAAAGAAATGCTCGATTCAAAATCTTAAAGGTCGGTTGGAATTACTCTCAAAGCTTCACCATCCAAATTTGGTTAGCATCTTGGGTCATTGTATTGATGGTGGTGGACAAGATGATTCTAGTAGCTACGAACTTTATCTTATATATGAGTATGTGCCTAATGGGAATTATCGAGCCCACCTTTCAGAATTTTCTTCAGAAAAGGCACTTAAGTGGTCTGATAGATTGGCAATTTTAATTGGAGTTGCCAAGGCTGTGCATTTTTTACATACTGGGGTTATACCTGGCTGTTTTAGTAACCAATTAAAGACAAACAATATTTTGCTCGATGAGCATCACATTCCCAAATTAAGTGACTATGGGATGTCTATCATCAGAGAAGAGATTGAAAAGCTTGAGGTATGCTTACTGGCTTTTCAATACATCTATTTCCAAAGGACGACATTGGAAGATGATGTTTATGATTTTGGATTCATATTGTTTGAATCACTTGTTGGAACCATAGCAAGCGAGAAAGGAGAAGCATTTTTCCTGAATGAAAAGGCATCCTTTGGCAGTCAAGATGGTCGAAGAAAAATTGTGGATCCGGTAGTGTTGACCACCTGCTCTCAAGAGTCATTATCAATTGCAATATCTATAACAACCAAATGCATATCCCCAGAACCATCATCCCGTCCCTCTTTTGAGGATGTTCTATGGAACTTACAGTATGCAGCTCAAGTCCAGGCCACAGCAGATGCAGATTCTACAACCTAA 2331 0.4007 MLHAGSMRNFHLYLVVLSWFLSIPTTHELQAAHTQVLLQLRKYLENPSSLEIWENYNGDLCNISPSARMSIKCRDNSVTELKIMGDKPVKVNQFNGLAIPNQTLSESFSTDSFVTTLTRLTSLRVLSLVSLGIWGPLPDKIHRLSLLEILDLSSNFLYGSIPPKISTMVKLHTLTLNGNYFNSTMPDWFDSLSNLHVLSMKNNRLKGAFPTSLCKIKMLTDISLSHNHLSGGLPDLSTLTGLHVLNLGENQLDSELPLMPKAVVTVLLSKNSFSGKIPKQFGELDQLQHLDLSSNHLSGIPPFTLFSLPNISYMNLASNILSGSLPNHLTCGSKLGFVDISSNKLMRRLPSCLASTSDTRVVKYRGNCLTVDSQHQKRGSYCKEPITGEKKFRSQKIAAVVAIIIGLVLVLVLFVFGVFLCKRYHLRKMCRQHVLPRNVRANSSTGVSSELLASARFISQAGKLGTQASPVCRLFTIEELKEATKNFDKSTYIGEGSIGKSTATFQLYKGKLDNGSYVAIRSLDLSKKCSIQNLKGRLELLSKLHHPNLVSILGHCIDGGGQDDSSSYELYLIYEYVPNGNYRAHLSEFSSEKALKWSDRLAILIGVAKAVHFLHTGVIPGCFSNQLKTNNILLDEHHIPKLSDYGMSIIREEIEKLEVCLLAFQYIYFQRTTLEDDVYDFGFILFESLVGTIASEKGEAFFLNEKASFGSQDGRRKIVDPVVLTTCSQESLSIAISITTKCISPEPSSRPSFEDVLWNLQYAAQVQATADADSTT 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1752 776 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 93 760 - -
Glsi11g1752 776 SMART LRR_typ_2 144 168 IPR003591 -
Glsi11g1752 776 SMART LRR_typ_2 239 262 IPR003591 -
Glsi11g1752 776 SMART LRR_typ_2 192 215 IPR003591 -
Glsi11g1752 776 SMART LRR_typ_2 284 307 IPR003591 -
Glsi11g1752 776 Gene3D Ribonuclease Inhibitor 263 381 IPR032675 -
Glsi11g1752 776 Gene3D Ribonuclease Inhibitor 30 262 IPR032675 -
Glsi11g1752 776 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 263 387 - -
Glsi11g1752 776 ProSiteProfiles Protein kinase domain profile. 487 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g1752 776 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 30 261 - -
Glsi11g1752 776 Gene3D Phosphorylase Kinase; domain 1 461 576 - -
Glsi11g1752 776 ProSiteProfiles Leucine-rich repeat profile. 286 307 IPR001611 GO:0005515
Glsi11g1752 776 Gene3D Transferase(Phosphotransferase) domain 1 577 775 - -
Glsi11g1752 776 SUPERFAMILY L domain-like 107 372 - -
Glsi11g1752 776 Pfam Leucine rich repeat 286 345 IPR001611 GO:0005515
Glsi11g1752 776 Pfam Leucine rich repeat 170 229 IPR001611 GO:0005515
Glsi11g1752 776 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 577 776 - -
Glsi11g1752 776 Pfam Protein tyrosine and serine/threonine kinase 492 758 IPR001245 GO:0004672|GO:0006468
Glsi11g1752 776 SUPERFAMILY Protein kinase-like (PK-like) 469 760 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1752 Glsi-ChrGlsi11 10934866 10939206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1752 12 705 Miscellaneous Gene Families AT5G14210 58.262 0.0 770
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Glsi11g1752 PK_Tyr_Ser-Thr 8.9e-22 CL0016