Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1748 ATGGCGTTTTTGGAGTTATACCGAAGGTTTGGAAAATGCCTTGGTAAGAAAATCACCCTCTGGGAGAGAACGAGTGAAAGAAAGAGGATTGGCCTTGAAAGGGAAGTTTATGTCGCTCATGTGTCCGATTGCTCCCATTGCTTCAATACTGTATCGTATGTGGATTCTCAGGGCGATAGGTCCCACTGGAAAATAAATGCTGTTTTTAGAATTGGAAGATGGGACTTTACAGTTCCACTTAGAGCACTTTCGGTACTTTGGGTTTTGAATAACAAAATTTCTGCTGAATTCTCCACTATTGAGGACGAGGTAGTCCCCTGTGATGACGTGAATCTTGTTTTTCTAATCTTGAAAACCCCGTCTACTTTTGACTTCACAGAATCCAAGCTAACCTCGCGAAGTTATTGCTATGTGATGGCCCTTAACTTAACCAGCATGAATCTCATCTTTAATCCTCAGAAAGTCGTAAAAAGGTTCCAAACAATTGTAATAGCGCTTCAGAAGCACCATTGTAATGGGCTTATCAAAATTCATCGATACAAGAAACATAAGATATGCAAAGCAGTGATGCCAGAGGCCTTCCTCATATGTACAGAGCTGAGTGGTCTTGGGCACAGTAGAACTAGAAATTATCTTAAGCTCCACCTGAGAGCTTTGGTCTTCTTCCTTTGCCTATTTCTACCCTCACTTGGAAAAGACCTGCTGAGCTGCAAGACAACATCCCCAGATGCCTCTGGCTACCTTTGCAATGGCAATGGATCATCACAGAGCCAATGCGGAACATTTGCAGTCTTACGCACTAATTCATACTACTCGTCTCTCTTCAACCTGAGCTTTTACTTGGGAATCAATCGCCTTGTAATTGCAGAAGCAAATGGGTTCTCTGCTGAAACAGAGTTCCTCTCCCAGGGTCAACCTCTGTTGATACCAATTGATTGTAAATGCAAAGGTGGCTTCTTTGAGGCTGAATTAACCAAAACAACCGTCAAAGGGGAGAGCTTTTATGGTATTGCTCAATCACTGGAAGGCTTGACTACCTGCAAGGCTATCCGAGACAAGAACCCGGGTGTGTCACCGGGGGATCTTGATGGTAAAGTCAGGTTACTGATCCCATTAAGATGTGCCTGCCCATTTTCATATAAAGTTAGTCCAGAACCAAGACTTCTGCTTTCTTATCCAGTAAGCGAAGGTGATACAATATCCAACTTTGCGTCGCAGTTCAATACTACAATAGCAGCTATTATTTCTGCAAATAACGTATCATCAGGAAGGTTTAAACCTGAAAGCCTTACACCCTTTACCTCTCTTCTAATTCCACTAAACGGTAAGCCTATTCTTGCTTCTCTAGCCAAACCTAGTAGTAGTCCGCACAAGAAGTCAAAAATGAGGAAGACAGAACTGTATATTGGTCTAGCTGGGGCGATAGTTGGAGTTTGCGTTGCTCTTGCAGCAGCCTTCTTTGTGATCAGATTGAAGAACAAAAAGGAAGAGAATGGCAAAGGAGGAGGCGATATGGAGCTTCAGCATCTCAATCTTAGCGTAAGAACTACCAGCGACAAGAAAGTTTCTTTCGAGAGACCTCAGGGTACTGTTGATGGGAAAATTATTGGTGCTACACCTCGTAGGACGCTGCTGGAAACATACACTATTGAGGAGATGAGGAAAGCGACTGAGGACTTCAATTCAAGCAATCACATTGAGGGATCTGTATTTCATGGTCGTCTAAATGGTAAGAACATGGCCATCAAACGTACGAACACCGAAACGATGTCAAAGATAGATTTTGGACTCTTCCATGATGCACTTCACAACCACCCCAACATACTCAGGCTGCTCGGAACATGTTTCACCGAGGGTCCGGAATCTTTTTTGGTTTTTGAGTATTCCAAAAATGGGACATTGAAAGATTGGCTTCACGGTGGGTTGGCCATCAAGAACCAGTTCATTGCTTCCTGCTATTGTTTCCTGTCATGGAGCCAGAGGCTCAGGATCTGCCTTGATGTGGCCAAGGCCTTGCAGTATATGCACCACGTTATGAAACCAAGCTATGTGCATAGAAATGTAAAGAGTAAGAACATCTTTCTAGATGAAGAATTTGGTGCAAAGATAGGGAAATTTGGGATGGCAGGGTGTGTTGAGAACGACACTAAGGACCCATTTTTGTATTCAACCAACCCTGCCTCCTCTTGGAGTCTGGGCTATTTGGCCCCTGAATATGTGCACCAAGGTGTAATTTCCCCAAGCATCGACATCTTTGCGTATGGGGTGGTTTTGCTTGAAATGTTGTCAGGTCAAACCCCTATAAGCAGGCCCAATGAGAAAGGGGAAGGAAGCATTTGGCTTACAGATAAAATAAAGTCCATTTTGAAGTCAGAAAATATGGATGAACTAAGGGAATGGATGGACAGCACACTGGGTGAAAATTATTCATTTGATGCGGCTGTGACAGTGGCAAATATTGCAGGAGCTTGCGTAGAGGAGGATTCCTCTCTGAGGCCAAGTGCTCGGGAAGTTGTAGAGAAGTTATCACGATTGGTCGAGGAATTACCAGAAGAGGAGCATATGTTAATGTGTGAAAGCTCATGCAAACCTCTGGTGATAGATAATGTGTGA 2613 0.4355 MAFLELYRRFGKCLGKKITLWERTSERKRIGLEREVYVAHVSDCSHCFNTVSYVDSQGDRSHWKINAVFRIGRWDFTVPLRALSVLWVLNNKISAEFSTIEDEVVPCDDVNLVFLILKTPSTFDFTESKLTSRSYCYVMALNLTSMNLIFNPQKVVKRFQTIVIALQKHHCNGLIKIHRYKKHKICKAVMPEAFLICTELSGLGHSRTRNYLKLHLRALVFFLCLFLPSLGKDLLSCKTTSPDASGYLCNGNGSSQSQCGTFAVLRTNSYYSSLFNLSFYLGINRLVIAEANGFSAETEFLSQGQPLLIPIDCKCKGGFFEAELTKTTVKGESFYGIAQSLEGLTTCKAIRDKNPGVSPGDLDGKVRLLIPLRCACPFSYKVSPEPRLLLSYPVSEGDTISNFASQFNTTIAAIISANNVSSGRFKPESLTPFTSLLIPLNGKPILASLAKPSSSPHKKSKMRKTELYIGLAGAIVGVCVALAAAFFVIRLKNKKEENGKGGGDMELQHLNLSVRTTSDKKVSFERPQGTVDGKIIGATPRRTLLETYTIEEMRKATEDFNSSNHIEGSVFHGRLNGKNMAIKRTNTETMSKIDFGLFHDALHNHPNILRLLGTCFTEGPESFLVFEYSKNGTLKDWLHGGLAIKNQFIASCYCFLSWSQRLRICLDVAKALQYMHHVMKPSYVHRNVKSKNIFLDEEFGAKIGKFGMAGCVENDTKDPFLYSTNPASSWSLGYLAPEYVHQGVISPSIDIFAYGVVLLEMLSGQTPISRPNEKGEGSIWLTDKIKSILKSENMDELREWMDSTLGENYSFDAAVTVANIAGACVEEDSSLRPSAREVVEKLSRLVEELPEEEHMLMCESSCKPLVIDNV 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1748 870 FunFam PTI1-like tyrosine-protein kinase 3 629 856 - -
Glsi11g1748 870 SUPERFAMILY Protein kinase-like (PK-like) 543 842 IPR011009 -
Glsi11g1748 870 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 231 849 - -
Glsi11g1748 870 Pfam Protein kinase domain 568 840 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g1748 870 CDD LysM 391 438 IPR018392 -
Glsi11g1748 870 ProSiteProfiles Protein kinase domain profile. 530 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g1748 870 Pfam LysM domain 392 439 IPR018392 -
Glsi11g1748 870 Gene3D Transferase(Phosphotransferase) domain 1 629 861 - -
Glsi11g1748 870 SMART LysM_2 391 439 IPR018392 -
Glsi11g1748 870 SMART LysM_2 325 371 IPR018392 -
Glsi11g1748 870 Gene3D LysM domain 390 439 IPR036779 -
Glsi11g1748 870 Gene3D Phosphorylase Kinase; domain 1 538 628 - -
Glsi11g1748 870 ProSiteProfiles LysM domain profile. 390 438 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1748 Glsi-ChrGlsi11 10911856 10920918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1748 246 866 LysM Receptor-like Kinase (LYKs) Gene Family AT3G01840 42.466 4.65e-160 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Glsi11g1748 Pkinase 1.8e-31 CL0016