Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1745 ATGCCGGAGGAGACGACGTCGATCGACTACGTCATGGAGGCTGCTTCCGGGCCCCATTTCTCGGGACTGCGCCTTGACGGTCTCCTCTCCTCTCCACCTTCTTCATCTTCTTCATCTCCTGCTCATCGATTTTCCTCTGCTGCTATTTCTGCTATAGATTCCTCAACCCTACCTCCCGATTCTGCTCCCAAACAGCCCTTCGTTATCGGAGTTTCGGGAGGTACTGCTTCTGGGAAGACCACTGTATGTGACATGATTATCCAACAGCTTCACGATCACCGCGTTGTGCTAGTCAATCAGGATTCATTTTATCGTGGTTTGACGCCTGAAGAATCGGAACGTGCGCACGAGTACAATTTTGATCATCCCGACGCTTTTGACACGGAGCAGCTGGTAGAATGCATGCAACAACTTATAAGCGGTCACTCTGTCCAAGTCCCGATTTATGACTTTAAGAAGCACCAGCGCTCTTCAGATAGTTTTCGGCAGGTCAATGCTTCTGATGTCATTATATTGGAGGGAATTCTTGTGTTCCATGATCAACGTGTGCGTGATCTGATGAACATGAAAATCTTTGTTGACACAGATGCTGATGTGAGGCTTGCTCGTAGAATTAGACGTGATACAGTGGAGAGGGGTAGGGATATAAATTCTGTTCTTGAACAGTATGCAAAGTTTGTCAAGCCTGCATTTGATGATTTTGTTCTTCCATCAAAGAAGTATGCTGATGTAATCATTCCCCGAGGAGGTGATAATCATGTTGCCATTGATCTGATTGTGCAACATATCCACACAAAGCTCGGTCAACATGATCTATGCAAAATATATCCAAACGTGTATGTTATTCAGTCAACATTCCAGATAAGGGGGATGCATACATTGATTCGTGACCGAGACATATCAAAGCATGACTTTGTATTTTATTCGGATCGACTTATACGTCTGGTTGTTGAGCATGGCCTAGGCCATTTTCCATTCACTGAAAAGCAAGTGGTCACTCCTACGGGATCTGTCTATACTGGTGTTGACTTTTGCAAAAAATTGTGTGGTGTTTCAATTGTTCGAAGTGGTGAGAGCATGGAGAATGCTCTGCGTGCATGTTGCAAAGGCATTAAAATTGGAAAAATTTTGATTCACCGAGATGGAGACAATGGAAAGCAGCTTATATATGAGAAGCTTCCCTTGGATATATCAGAACGGCATGTCTTGCTTCTTGACCCCGTCTTGGCTACTGGTAACTCTGCAAACCAAGCAATTGAGCTACTCATTCAGAAAGGAGTTCCAGAATCCCACATAATATTCCTGAATCTCATCTCTGCGCCTGAGGGAATCCATTGTGTGTGTAAAAGGTTTCCATCCTTGAAAATTGTAACATCCGAGATTGATGTTGCATTAAATGAAGAGTTCCGCGTTATCCCAGGACTGGGCGAGTTTGGTGATCGCTACTTTGGAACTGACGATTAA 1464 0.4433 MPEETTSIDYVMEAASGPHFSGLRLDGLLSSPPSSSSSSPAHRFSSAAISAIDSSTLPPDSAPKQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTPEESERAHEYNFDHPDAFDTEQLVECMQQLISGHSVQVPIYDFKKHQRSSDSFRQVNASDVIILEGILVFHDQRVRDLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDRDISKHDFVFYSDRLIRLVVEHGLGHFPFTEKQVVTPTGSVYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPLDISERHVLLLDPVLATGNSANQAIELLIQKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTDD 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1745 487 PRINTS Uridine kinase signature 198 208 - -
Glsi11g1745 487 PRINTS Uridine kinase signature 66 83 - -
Glsi11g1745 487 PRINTS Uridine kinase signature 212 223 - -
Glsi11g1745 487 PRINTS Uridine kinase signature 96 107 - -
Glsi11g1745 487 PRINTS Uridine kinase signature 234 247 - -
Glsi11g1745 487 PRINTS Uridine kinase signature 141 156 - -
Glsi11g1745 487 CDD UMPK 68 266 IPR000764 -
Glsi11g1745 487 FunFam Uridine kinase 270 485 - -
Glsi11g1745 487 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 259 IPR027417 -
Glsi11g1745 487 SUPERFAMILY PRTase-like 269 486 IPR029057 -
Glsi11g1745 487 Gene3D - 62 269 IPR027417 -
Glsi11g1745 487 CDD PRTases_typeI 343 458 IPR000836 -
Glsi11g1745 487 Gene3D - 270 485 IPR029057 -
Glsi11g1745 487 PANTHER URIDINE KINASE 60 394 - -
Glsi11g1745 487 FunFam Uridine kinase 63 269 - -
Glsi11g1745 487 Pfam Uracil phosphoribosyltransferase 284 485 - -
Glsi11g1745 487 Pfam Phosphoribulokinase / Uridine kinase family 68 254 IPR006083 GO:0005524|GO:0016301
Glsi11g1745 487 NCBIfam uridine kinase 65 266 IPR000764 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1745 Glsi-ChrGlsi11 10893423 10899102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1745 1 487 PRT Gene Family AT5G40870 86.448 0.0 850