Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1738 ATGCCTGTCCTTCCGCTGCACCCTTTCTTGTTCATTTTATTGTTCTTCTTCCTTTTCTACACAGCGCTAACTGAATTCCGGCGACTTCGAAAACTCTCCACCCACGGCCCACCCACTTACCCTGTCATAGGATGCTTAGTATCCTTTTACAGCAACCGGAACCGCCTGCTAGATTGGTACACTGAGCTCCTGGCTCACTCTCCCACCAACACCATACTCGTGCACCGCCTAGGGGCTCCTAGGACCATTGTCACTGCAAACCCACAGAACGTTGAGTACATCCTGAAAACCAACTTTAATAATTTCCCCAAAGGCAAGCCCTTCACTGAGATCCTCGGTGATTTTCTTGGGCATGGCATCTTCAACGTGGACGGTGACCTCTGGTGGACCCAACGTAAACTAGCCAGCCATGAGTTCACTGCAAGGTCGTCCTTGAGACAATTTGTCATGCAGACTTTGGAGGAAGAGGTGGATAAGCGCCTCTTGCCCGTGCTGGATTCCTTGTCCATGCAAGAACAAGTGGTGGACTTGCAGGACTTGCTAGCAAGATTCTCGTTTAATACGATCTGTAAAGTTACATTAGGGATCAGCATGTGCTGCTTGGATCCTTGTGTACCCATTTCGCCTCTTGCGAGAGCCTTTGATATAGCCTCAGAGATATCTGCAAGACGTGGAGCAGCACCTTTGTTCATGATCTGGAAGATGAAGAGATGGCTTGGAGTTGGATCTGAACGGAGGCTTAGAGAGGCTGTTGAAGAAGTTCAGACCCATGTGATGGAAATGATTCATGAGAGGAAGAAGAAGATGATGAACGTAACAGAAGAAACCAATTGTGGCACTGAAGATCTCCTCTCACGGCTTATATCTGCAGGTCATGAAGAGGAGATGATTAGAGACATGTTGATAAGCTTTATATTGGCAGGGAGAGACACTACGTCGGCAGCTATGACATGGTTCTTCTGGTTGCTTTCCCATCATTCAGCAATGGAGCAGCAGGTTGTGGAAGAGACAGAACTTAAGGCAGCTGGAGCATTAAACTATGAATCATTGAAGAAATTGAAGTTGTTAAAGGCATGCCTTTGTGAGTCTATGAGGCTGTATCCACCTGTGGCCTGGGATTCCAAGCATGCCACAGTTGATGATTTGCTGCCAGACGGTACTCCGGTCAAGGCAGGAGATAGAGTCACTTATTTTCCTTATGGGATGGGAAGGATGGAAGAATTGTGGGGGAAGGACTGGTTCGAGTTTAGACCAGATCGGTGGTTTATTGAATCGAACAACAATAAAGGAACAATGACTAAGGTGTCTCCGTTCATGTTTCCAGTTTTTCAGGCTGGTCCCAGAACATGCATTGGGAAGGAGATGGCTTTCATTGAGATGAAGTATGCGGCCGCTTCAATTCTTCGGCGATTCAAAATCAGATCATTTAGCCCAGAGAAGCCTATATTCGTGCCACTTCTGACGGCACACATGGCCGGCGGGCTTAAGGTGTTGGTTTGCAGAAGGGAGAAAGAAACTGACTTAGATGGGCTCAATTCTTTTTTGAATAAACCGCAATAA 1560 0.4705 MPVLPLHPFLFILLFFFLFYTALTEFRRLRKLSTHGPPTYPVIGCLVSFYSNRNRLLDWYTELLAHSPTNTILVHRLGAPRTIVTANPQNVEYILKTNFNNFPKGKPFTEILGDFLGHGIFNVDGDLWWTQRKLASHEFTARSSLRQFVMQTLEEEVDKRLLPVLDSLSMQEQVVDLQDLLARFSFNTICKVTLGISMCCLDPCVPISPLARAFDIASEISARRGAAPLFMIWKMKRWLGVGSERRLREAVEEVQTHVMEMIHERKKKMMNVTEETNCGTEDLLSRLISAGHEEEMIRDMLISFILAGRDTTSAAMTWFFWLLSHHSAMEQQVVEETELKAAGALNYESLKKLKLLKACLCESMRLYPPVAWDSKHATVDDLLPDGTPVKAGDRVTYFPYGMGRMEELWGKDWFEFRPDRWFIESNNNKGTMTKVSPFMFPVFQAGPRTCIGKEMAFIEMKYAAASILRRFKIRSFSPEKPIFVPLLTAHMAGGLKVLVCRREKETDLDGLNSFLNKPQ 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1738 519 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1738 519 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1738 519 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1738 519 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1738 519 FunFam Cytochrome P450 27 505 - -
Glsi11g1738 519 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1738 519 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1738 519 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1738 519 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1738 519 PANTHER CYTOCHROME P450 23 497 - -
Glsi11g1738 519 CDD CYP86A 71 495 - -
Glsi11g1738 519 Gene3D Cytochrome P450 27 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1738 519 Pfam Cytochrome P450 35 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi11g1738 519 SUPERFAMILY Cytochrome P450 36 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1738 Glsi-ChrGlsi11 10861581 10863140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1738 37 503 Cytochrome P450 AT3G01900 60.381 0.0 581