Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1734 ATGGCAGCAGAAAATATCCATAAATCTCCGGTATCCTTGGATAGAGCGTGCTATACTACAGCTGCAATTAATCAAAATGAAATATGGAAAAGTGATAACATCCTTACAAACTATGCTCCTACGTTGGCTATCCAAATCGCCGTCACCATCTGCGCTTCTAGCATTATCCACCGCATCCTCAAGCCCCTTCATCTGCCTCGTCTTATTGCTGAGGTTCTTACTGGTTTTATTTTGAGTCCTCCTTTATTGGGAAGTACTCCATTAGGGAGGGAGCTTTTACCTAGAGGGGGAATCCTTATTATTGAAACCTATGCAAATATGGGGCTCGTGTTTTACGTCTTCGTCAGTGGCTTGGAGATGAACTTAGATAATATCCAGCAAGTACGAAAGATGGCTACAAGCATCGCAGTTGCTGGGATTATTATTCCATTGGTGATTGGAATGGGCTTGTTTTCTATAATACAAAAATTTTACGACAAATCTGTAATGATTGGGCCATATCGGTATTATGAAGATGACAGATTTACGGCTAAAGCTTATATATTTTGGAGTTTGGCTCTTACTGTCACAGGTTTTCCGGTGCTTGCTCGTATCCTTGCTGATCTCAAGCTCCTCTATACCGGGCTAGGGAGAGCCGCATTAACAGCAGCCATGATTGGCGACACCTATGGTTGGATTATGTTTATAATATCAATTCCATTTGCCAATAACGATGCAGGAGGAATCTTGTCAGTGATGAGTACCATATTGTTCATCCTTTTCAGCATCTTCGTGTTACGCCCTCTCGTTACGCCACTCATTGAAAGCAAAACCGACCAGGATACCTGGCACGATTCTCATTTGCTCTTTGTGTTACTGGGGGTTTTTGTTTGTTCATATATTACAGATATGCTTGGCACACACTCCATTGTTGGGGCTTTTGTGTTTGGACTCATTTTACCTCAGGGGACGTTTTCCAATTTGGTGATGGAAAAGGTGGATGAATTTGTTTCTGGGGCCATATCGCCAATCTTCTTTTTGCGTTCTGGCTTAACAGTAAACTTGTCGATGGTTGCAAGTCAAAAATACTGGCCCTTGATGGCGCTGGTTGTACTCTTGCTATGCATCCCAAAAGTTTTAAGCACTTTGATAGCTACTTTCTTCTATGGGATACCCACACGAGATGGTGTGGGCATTGGACTGCTTCTCAACGCCAAAGGAGTCTTGGCACTGATAATATTAAACATGGCCTGGGACAGAAAGATTTTGTCTGTGGTTACCTTCTCGATTATGGTGTGTGCAGTTCTTATAATGACTATCACCGTGCCTCTTTTCATTAATGCCATATACAAACCAAGAAAACGATTTGAGTCGTACAGGTTAAGAACTATACAAAAGTTAAGGGTTGATGCGGAGCTTCGAATTCTAGTTTGTGTCCACAATGCTCGCCAAGCTGCCGGCATGGTCAACATCCTTGAAACTGCCAATGCTACCAGGGTTTCCCCTTTGCATGTGTTTGGGGTTCACCTTGTTGAACTTACAGGACGTGCCACTGCCCTTTTTGCTGCCCACATGGAGCAGACTACCAATGTCGGAGCACAGAACCTCACCCAATCACAAGCAGAGTCAGAGAGCATTTCCCATACCTTCGACGCATTATCAGAGGCATGTAATGCTGTCAGAGTTGATACCCTCCACGCTGTGTCGAATTATGAAACCATTCATGAGGACATATCCAACATAGCAGAGCAAAATCGAACAGCCTTAATTCTCCTTCCTTTCCATAAACAACTAGATGCAGAAGGTGGTCTAGAGACAACCAACGTAGCATACAGAGACATAAACCAAAATGTTTTGCAACATGCACCTTGTTCTGTGGGAATCTTCGTTGATCGTGGTCTTGGTTCATTGTCCAGAAACAAGTTACGCATTCTTATGCTCTTCTTTGGCGGGCCCGACGACCGTGAAGCCTTGGCAGTTGCCTGGAGAATGGCTGGGCGTCCAGGAATCCAACTTTCCATGGTGAGGATTTTCTTGTTTGGTGAAGCTGCGGAAGAGGATATGTTCGCCCATGCTGAAACTCCATGGCTATCATCTGTAATAATGGACGGTGAGAGGCAGAAGTTGTTGAACGAAGAGTACGTGAGTTCATTCAGGCTCAAGGCCGTTAACAATGACGAATCTATATCATACTCAGAGAAGCAAGTCCAAAGTGCGGAGGAAATAACTTCAGCCCTCCGTGAATTGGACAAAAATGACTATGATTTGTACATCGTTGGACGAGGTGATGGAAGGAACTCCCTAGCGTTTTCAAATTTTATGGAATGGTGTGATAACCCAGAACTTGGAGTTATAGGGGACATAGTAGCATCAAACACTTTCGGTTCACGCTCTTCGCTGCTTGTAGTACAGCAATACGGGCCTGGGGGAGTGATGCTTGGGACTCAGACTCGGCATCCCGGACAGTTGCCAACAAAGAGTGACGGTTCTGAGACGCTTGTAGTGAATACTGCATGA 2496 0.4435 MAAENIHKSPVSLDRACYTTAAINQNEIWKSDNILTNYAPTLAIQIAVTICASSIIHRILKPLHLPRLIAEVLTGFILSPPLLGSTPLGRELLPRGGILIIETYANMGLVFYVFVSGLEMNLDNIQQVRKMATSIAVAGIIIPLVIGMGLFSIIQKFYDKSVMIGPYRYYEDDRFTAKAYIFWSLALTVTGFPVLARILADLKLLYTGLGRAALTAAMIGDTYGWIMFIISIPFANNDAGGILSVMSTILFILFSIFVLRPLVTPLIESKTDQDTWHDSHLLFVLLGVFVCSYITDMLGTHSIVGAFVFGLILPQGTFSNLVMEKVDEFVSGAISPIFFLRSGLTVNLSMVASQKYWPLMALVVLLLCIPKVLSTLIATFFYGIPTRDGVGIGLLLNAKGVLALIILNMAWDRKILSVVTFSIMVCAVLIMTITVPLFINAIYKPRKRFESYRLRTIQKLRVDAELRILVCVHNARQAAGMVNILETANATRVSPLHVFGVHLVELTGRATALFAAHMEQTTNVGAQNLTQSQAESESISHTFDALSEACNAVRVDTLHAVSNYETIHEDISNIAEQNRTALILLPFHKQLDAEGGLETTNVAYRDINQNVLQHAPCSVGIFVDRGLGSLSRNKLRILMLFFGGPDDREALAVAWRMAGRPGIQLSMVRIFLFGEAAEEDMFAHAETPWLSSVIMDGERQKLLNEEYVSSFRLKAVNNDESISYSEKQVQSAEEITSALRELDKNDYDLYIVGRGDGRNSLAFSNFMEWCDNPELGVIGDIVASNTFGSRSSLLVVQQYGPGGVMLGTQTRHPGQLPTKSDGSETLVVNTA 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1734 831 Pfam Sodium/hydrogen exchanger family 49 438 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Glsi11g1734 831 Gene3D - 465 763 - -
Glsi11g1734 831 Gene3D - 40 451 IPR038770 -
Glsi11g1734 831 PANTHER CATION/H + ANTIPORTER 17 799 - -
Glsi11g1734 831 MobiDBLite consensus disorder prediction 812 831 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1734 Glsi-ChrGlsi11 10841138 10843828 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1734 17 799 Antiporter Super Family AT2G13620 39.673 0.0 601