Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1729 ATGGACATAAGATCGATAGTATTGGTTTTGTTAGTAGGTTTTTGGATTATGTCTACTGGAGAAGGGCAACTAGCGGAAAATTTCTACAGTTCGACTTGTCCAAGCGTGGAATCTATTGTTAGCCAGGCCGTGACCACTAAGTTCACCCAGACTTTCACCACCGTACCATCAACTCTTCGTCTCTTTTTTCATGACTGCTTCGTTGAGGGATGTGATGCCTCGGTGATGATCGCGTCACCAAGTGGGGATGCAGAGAAGGATGATTCCGATAATCTTTCCCTAGCGGGAGATGGGTTCGACACTGTGATAAAGGCGAAGCAAGCAGTGGAAGCTGCATGCCCTGGCGTGGTCTCATGCGCCGACGTTTTGGCACTTGCGGCCAGAGATGTTGTAGCCTTGGCTGGAGGCCCTTCATTCAACGTAGAACTTGGACGTAGAGATGGTCTGGTTTCTCAGGCATCCCGGGTTGCCGGAAACCTGCCAAAAGCAAACTTCAATCTGAACCAACTCAATGCCATGTTTTCGAAGCACAATCTGAACCAAATTGATATGATTGCGCTGTCTGGAGCACACACCGTGGGGTTCTCCCATTGCAACCAGTTTACGAATCGCTTATACTCTTCTACGGTAGACCCTTCTTTGGACTCAGACTTCGCCAAGCAGTTAATGGAGTCTTGCCCGAGAAATTTTGACCCAAGTGTGGCCATTAATCTGGATCTTCAAACCCCTCAAGCGTTTGACAATATGTATTACCAAAACCTGGTTGCAGGAGAAGGTTTGTTGAGTTCGGATCAGGTGCTCTTCACTGACTCTGCATCTCAGTCCACGGTGGTTGAGTTTGCTAACAACCCCGGCGACTTCAACGGCGCCTTTGCCACGGCTATGAGGAAGCTGGGTAGGGTTGGGGTCAAGACTGGGAAGGAAGGAGAGATTAGAACAGATTGCACAAAATTTAATTCTTGA 963 0.4839 MDIRSIVLVLLVGFWIMSTGEGQLAENFYSSTCPSVESIVSQAVTTKFTQTFTTVPSTLRLFFHDCFVEGCDASVMIASPSGDAEKDDSDNLSLAGDGFDTVIKAKQAVEAACPGVVSCADVLALAARDVVALAGGPSFNVELGRRDGLVSQASRVAGNLPKANFNLNQLNAMFSKHNLNQIDMIALSGAHTVGFSHCNQFTNRLYSSTVDPSLDSDFAKQLMESCPRNFDPSVAINLDLQTPQAFDNMYYQNLVAGEGLLSSDQVLFTDSASQSTVVEFANNPGDFNGAFATAMRKLGRVGVKTGKEGEIRTDCTKFNS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1729 320 FunFam Peroxidase 161 298 - -
Glsi11g1729 320 Gene3D - 27 319 - -
Glsi11g1729 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Glsi11g1729 320 ProSiteProfiles Plant heme peroxidase family profile. 23 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g1729 320 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Glsi11g1729 320 PANTHER - 7 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g1729 320 SUPERFAMILY Heme-dependent peroxidases 23 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi11g1729 320 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g1729 320 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g1729 320 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g1729 320 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g1729 320 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g1729 320 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g1729 320 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g1729 320 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g1729 320 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g1729 320 Gene3D Peroxidase, domain 2 161 298 - -
Glsi11g1729 320 CDD secretory_peroxidase 23 318 IPR033905 GO:0004601|GO:0042744
Glsi11g1729 320 Pfam Peroxidase 41 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g1729 320 FunFam Peroxidase 27 172 - -
Glsi11g1729 320 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g1729 320 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g1729 320 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g1729 320 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g1729 320 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1729 Glsi-ChrGlsi11 10811415 10813089 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1729 1 319 Peroxidase AT5G14130 60.423 8.59e-141 401