Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1720 ATGCTGTTTCCTTGTCCTTCTTCAAGTTATCCAATTTCATCGAGTGCCGTGAGTTTGGGAAACTCTTATCATGGTTTTAGTGATTTTGGCGGTCAGAGCTCAAATGGGTTGCTAGGTTTGAGGCCTACTGAAGGTAGTGATCACCAGTTGCAGAAAAGAGCAGAAGCTAGAGATGGCCTAATATTATCTGAGAGTGGAAGCACTGACGTGACTAATCAGCAAGGAGGTTCAGCTAAAAAGAAGGGGGAGAAGAAGGTTAGGAAGCCTAGATATGCTTTCCAAACACACAGTCAAGTTGATATACTTGATGATGGCTATAAGTGGAGGAAATATGGCCAAAAAGCTGTTAAAAACAACAAGTTCCCCAGGAGCTACTACAGATGTACTCATCAAGGGTGCAATGTGAAGAAGCAAGTGCAACGCCTAACCAAAGACGAGGGCGTTGTGGTGACCACTTATGAGGGAGTGCATACGCATCCAATTGAGAAGACGACAGACAACTTCGAGCACATCTTGAGTCAGATGCAAATATTTAGTACTCCCTTTTAA 549 0.4353 MLFPCPSSSYPISSSAVSLGNSYHGFSDFGGQSSNGLLGLRPTEGSDHQLQKRAEARDGLILSESGSTDVTNQQGGSAKKKGEKKVRKPRYAFQTHSQVDILDDGYKWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIEKTTDNFEHILSQMQIFSTPF 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1720 182 SMART WRKY_cls 102 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi11g1720 182 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 56 164 IPR044810 GO:0003700
Glsi11g1720 182 SUPERFAMILY WRKY DNA-binding domain 94 161 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi11g1720 182 Gene3D WRKY domain 85 161 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi11g1720 182 MobiDBLite consensus disorder prediction 58 88 - -
Glsi11g1720 182 ProSiteProfiles WRKY domain profile. 97 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi11g1720 182 Pfam WRKY DNA -binding domain 103 160 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi11g1720 182 FunFam WRKY transcription factor 57 88 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1720 Glsi-ChrGlsi11 10771552 10772826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1720 90 180 WRKY Transcription Factor Family AT5G13080 85.714 1.36e-56 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi11g1720 WRKY 2.8e-26 CL0274