Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1715 ATGGACATGGGTAACTGTTTTCTCTATGCCATTACAAAGTTGGATTCTGTTTGTGATTGGAAAATCCAATACCCTCGAGCCAACCCAAAGTCTTATTTCAGAAAATATAGCAACGAGGCACATGGCACAGAGGCACAGATTGTGACATCTTGGATTAGCATACTGAGTGATGAGTTGACTGCAGGGATAGTGTCCAAGGTGGTGAAAGTGAAACAGGCAGTTAAAGTTGCTTTCACATCAGACTGGTCAAAACCCACTGCTTTGAGAAAGAGTTTAGGCTTTTCAGCTACCCCTTCTTCACCCCATCTTCTTTTATTTTTTCCTCTTCTCTTCATGGATCCCAAGAGCTCAAAGCAGCAACAGGAGGCATCCAACTTCTTGACTCTCCCACAGCCACAATCCAGTATGGGAGAGAACAAAGCAGCTCAAGTCAAGGATTTCCAGATTGTGATTGCGGACAAGGAAGAAAGCAAGAAACAGTTGGCCCCCAAGAGGAGTTCAAACAAGGACAGGCACACCAAGGTCGAAGGTAGGGGAAGGAGGATAAGGATGCCTGCTCTTTGTGCGGCTAGAATATTTCAGTTGACCAGGGAATTGGGTCACAAATCTGATGGGGAAACCATACAGTGGCTTCTGCAGCAGGCGGAGCCGTCCATAATCGCGGCCACTGGAACTGGCACAATACCCGCATCAGCTTTAGCTGCGGCTGGCGGCTCTGTTTCACAAGAGGGGACCTCTCTATCGGCCGGATTGCACCAAAAGATTGATGAATTAGGCGGGTCCAATATTGGGTCAGCCAGTAGGACCAGCTGGGCAATGGTTAGTGGAAATTTGGGGAGACCCCATGTGGCCACAGGTCTATGGCCCCCAGTCAGTGGATTTGGGTTTCAGTCATCATCCGGTCCATCCGCAACGAGTATAGGCAGTGAGAGTTCAAATTACCTGCAAAAGATTGCGTTCCCTGGGTTTGACTTGCCAGCCACCAACATGGGTCCTATGAGTTTCACCTCGATTCTGGGTGGGAGTAACCAGCAGATGCCTGGTTTGGAGCTGGGATTGTCTCAAGATGGTCACATCGGGATTCTGAACCCACAAGCCTTGAGCCAGATTTACCAGCAGATGGGTCAAGCTAGAGAACACATACAACAGCAGCATCAGCATCAGCATCAGCATCAACAGCCTCCTGCTAAGGATGATTCTCAAGGTTCAGGGCAGTAG 1218 0.4893 MDMGNCFLYAITKLDSVCDWKIQYPRANPKSYFRKYSNEAHGTEAQIVTSWISILSDELTAGIVSKVVKVKQAVKVAFTSDWSKPTALRKSLGFSATPSSPHLLLFFPLLFMDPKSSKQQQEASNFLTLPQPQSSMGENKAAQVKDFQIVIADKEESKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGGSVSQEGTSLSAGLHQKIDELGGSNIGSASRTSWAMVSGNLGRPHVATGLWPPVSGFGFQSSSGPSATSIGSESSNYLQKIAFPGFDLPATNMGPMSFTSILGGSNQQMPGLELGLSQDGHIGILNPQALSQIYQQMGQAREHIQQQHQHQHQHQQPPAKDDSQGSGQ 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1715 405 MobiDBLite consensus disorder prediction 157 177 - -
Glsi11g1715 405 ProSiteProfiles TCP domain profile. 168 222 IPR017887 -
Glsi11g1715 405 MobiDBLite consensus disorder prediction 373 405 - -
Glsi11g1715 405 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 118 380 IPR005333 GO:0003700
Glsi11g1715 405 Pfam TCP family transcription factor 167 257 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1715 Glsi-ChrGlsi11 10719232 10725090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1715 112 405 TCP Transcription Factor Family AT3G27010 54.321 1.39e-86 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Glsi11g1715 TCP 4e-30 No_clan