LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi11g1704	ATGGAGAAGAAACTTGCTGAAAGTTCCGGCAGTTTCGCTCGCAGAGACGAGCAAAACAACGCCGGCGAGACACCACGTTCGCCGTTGCCAGACCCCAGAGAGATCATTGATGCCAAATCGGATGATGATACCGTACCTGCTGCGGATACAGAGGGAGAGCCCAATGAGGAGAAGAAAGAAGAGGCTCCACTTGAGGTTCCCGAATCTCCTCCTTGCAGCCTCGAGAAGGCTTCAGAAGATATCGATCAATATCTTGTGACTCTGCAACAGAACGTACATGTTGACGAAACTTCTTTAGAGATCCCTGTTTTCATTGACAAGTTCTTGGATCTCGTCGAAGAGAACATCGCCAAGTACGAATCAGGCGAAGGCAAGGCCAGAAGATGGGGTGAGGTTGCAGAGGAAGATTCGTCACTGCTGGAAGCCGTGGATCGGATTTCAAAACTAATGAAATTGCTGATTCAGTCGCAATCTCCATCGGAAGAAATCAATGAACGAAAGGATTCGTTGATCAACCACATCGGTATCCTTCAACATCGAGCGATGTCGTATTTAGAGGAAGAGTTCCGGATGCTCATGGAAGAACCTCGAAGTCCTGGCGAATCCGATCCCGGTGTTCATGATCCGAAAGGGAAGCATGTAGAACCAGATCGTTGCCAATTGCCGGATCCTGAACCCACAGGATCGGACACAGATTTTCCGGGTTATACTGAGGAGGTCATTTCCAGTTTGAACAATATAGCAAAACAGATGATATCAGTTGGTTACCAATCCGAGTGTTGCCAGATTTATACCGTTTGCAGGAGGAACGCTTTCGAAGAGAGGTTGCACAAGATAGGGTTCGACAAAATCAGCATTGACGAGATTCACAAAATGCAATGGAAATCGTTAGAGAGAGAGATCCCCACATGGATCAAAACCTTCAAGGAATGCACCTCCGTCTACTTCTCCGGCGAACGGAAGCTGGCAGAGTCGGTGTTCAAAGAGAACCCATCGATAGCGGCGAGCCTTTTCAGCAATCTCTGTCGCGGCGTCGTCATACAGCTTCTCAATTTTGCTGAAGGCGTAGCCATGACGAAGCGCGCCGAGGAGAAGCTATTCAAAATCCTCGACGTGTACGAGACCTTGCGGGATGTAATCCCCACCTTTGATGATCTGTTCCCAGAAGAGTGTGTGAATGAGATGAAGACCGAAACGACGACGGCAAAATGCAGACTCGGCGAGGCTGCGATTTTTATTTTCTGTGAGTTAGAAAACTCGATCAAGTCAGACGCGGGGAAAACTCTGGTTCCCGGCGGTGCGGTTCATCCATTGACTCGCTACATCATGAACTATCTCCCATATGCATGCGAGTACAAGGACACGTTAGATCAAGTGTTCAAGGAACACTCGAAGATTGAACGTGCCGACTCGACCAGTAGGCCCCACTACGAGGGTGACGGGAATTCTCAAAACAACAACGAGGACCTGTCACCGTTTTCGTTGCAGTTGATGAGGATGATGTCTTTGCTGGATACGAATCTGGAAGGGAAGTCGAAACTGTACAGGGACGTGGCGTTGAGCTGCATCTTCATGATGAACAATGGCAGGTACATACTGCAGAAGATCAAAGGGTCATCAGAGATCTACAGCTTGATGGGTGACACGTGGTGTCGGAAGAGGTCGTCTGATCTGAGGACGTATCATAACAACTATAAGAGAGAAACATGGAGTAAGATTCTAAATTGTCTAAGCCATGAGGGGTTGAGTGTGAATGGGAAGGTACAGAAGCCGGTGCTGAAGGAGAGGTTCAAAAGCTTCAACGCGATATTCGATGAGATACACAAGACCCAGAGCACGTGGGTTGTGAACGACAAGCAGCTTCAGTCAGAATTAAGGGTTTCGATAACGGCGGTAGTGATTCAGGCATACAGGTCATTCCTGGGGAGGTTTTCTCAGTATTTGGACCCAGGAAGACAAACAGAGAAGTATATAAAGTACCAGGCTGATGATATAGAGACTTTCATTGATGAGCTATTTGATGGGAATGTCCAGTCCAATATGGCTAGAAGGAAACCATGA	2061	0.4784	MEKKLAESSGSFARRDEQNNAGETPRSPLPDPREIIDAKSDDDTVPAADTEGEPNEEKKEEAPLEVPESPPCSLEKASEDIDQYLVTLQQNVHVDETSLEIPVFIDKFLDLVEENIAKYESGEGKARRWGEVAEEDSSLLEAVDRISKLMKLLIQSQSPSEEINERKDSLINHIGILQHRAMSYLEEEFRMLMEEPRSPGESDPGVHDPKGKHVEPDRCQLPDPEPTGSDTDFPGYTEEVISSLNNIAKQMISVGYQSECCQIYTVCRRNAFEERLHKIGFDKISIDEIHKMQWKSLEREIPTWIKTFKECTSVYFSGERKLAESVFKENPSIAASLFSNLCRGVVIQLLNFAEGVAMTKRAEEKLFKILDVYETLRDVIPTFDDLFPEECVNEMKTETTTAKCRLGEAAIFIFCELENSIKSDAGKTLVPGGAVHPLTRYIMNYLPYACEYKDTLDQVFKEHSKIERADSTSRPHYEGDGNSQNNNEDLSPFSLQLMRMMSLLDTNLEGKSKLYRDVALSCIFMMNNGRYILQKIKGSSEIYSLMGDTWCRKRSSDLRTYHNNYKRETWSKILNCLSHEGLSVNGKVQKPVLKERFKSFNAIFDEIHKTQSTWVVNDKQLQSELRVSITAVVIQAYRSFLGRFSQYLDPGRQTEKYIKYQADDIETFIDELFDGNVQSNMARRKP	686

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi11g1704	686	FunFam	Exocyst subunit Exo70 family protein	123	681	-	-
	Glsi11g1704	686	MobiDBLite	consensus disorder prediction	194	235	-	-
	Glsi11g1704	686	MobiDBLite	consensus disorder prediction	467	488	-	-
	Glsi11g1704	686	MobiDBLite	consensus disorder prediction	1	74	-	-
	Glsi11g1704	686	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	109	675	IPR004140	GO:0000145\|GO:0006887
	Glsi11g1704	686	Pfam	Exo70 exocyst complex subunit	304	671	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Glsi11g1704	686	MobiDBLite	consensus disorder prediction	194	220	-	-
	Glsi11g1704	686	SUPERFAMILY	Cullin repeat-like	133	674	IPR016159	-
	Glsi11g1704	686	Gene3D	Exocyst complex component Exo70	122	683	-	-
	Glsi11g1704	686	MobiDBLite	consensus disorder prediction	30	65	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi11g1704	Glsi-ChrGlsi11	10646712	10648772	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi11g1704	43	685	EXO70 exocyst subunit family	AT5G13990	54.197	0.0	679