Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1666 ATGATCACTGTTTGCGATGTTTTAAACTCAGCAAATTTTGATTTCTTAGATGGTGAAACTGACTGGTACTTGGTTCTTCAAGTTCCACAAATGGCCGCTGAACAAGATGTGCAATCCCACTATAATAAATTTTCAACCCTTTTAAAATCCATCAAGTCCCACCTCCCTGCTGCTGGCTCTGCTCTGAAAATCGTTGAGGAAGCATACTCTGTTCTTTCAAACCCAGAAAAGCGCTCACTTTTTGACAAGAAAAGGACCACCAAGTTCGAAACTTGTGAATTACTGAATGTCCAGAAAATCCATGCTGTTGATTCCAGGCACGTTAGTCCTCTGGCTGAAACTATAGTTCAGAACAACGAAATATCTCCAACTCATACAACGTCAGAAAGGGCTACTCAAGACAGCCCTAAGTCAAGATCAAGAATAAGCACAGCTCCAGCAGATTCAGGAACTAAACTTTCTGAATCAGAATATAAATGGTCTATAAGAGATTTTGCTTGCAATCAAATATGGGCTGTACGTGATGATCCAGCAGCTGTGCCTAGGAGATATGTAGTAGTGAACAGCGTGGATCCAGAAGGTGAAATCTGGGTGACATTCTTAGAGCCTAATCCCATGAGTGCTGATGAGATACGCTGGGCTGAGAAAGGTCTTCCAATTGCCTGTGGTTCATTCAAGGCAGGTAAAACCACTAACGTCTTGGGGGCATGTCACTTTTCCCATCAAGTGAAGTGTGAGCGAAGCCAACACGATTCCTCCTACAAGAAACATCCCAAGAAAGGTGAGGTTTGGGCAATGTATAAGAACTGGAATTGCAAATGGGACCAATCAGACTTCACTCGTTGCCAATATCAGATTGTTGAGATTTTTACAGATTTGGCTGATGAATCTGAGATCCTTGTAGCCAGCTTAGTTGAGGTGCCGGGCTTTATGACCTTCTTTCAAAGGCAGCATTATAACGGGTATAAATTGATCCCTATACCACAATTTCTTTCATTCTCTCATCAGATAGAAGCTTTCCGAGTCCAGACAACGAAGGACAGGGGTATCTCCACGCCATTTTGGCACCTAGAACCAGACTCTTTCTGTTCTCTACGCCACCGGAGCAAGATTAATGCTGCTTAA 1125 0.4293 MITVCDVLNSANFDFLDGETDWYLVLQVPQMAAEQDVQSHYNKFSTLLKSIKSHLPAAGSALKIVEEAYSVLSNPEKRSLFDKKRTTKFETCELLNVQKIHAVDSRHVSPLAETIVQNNEISPTHTTSERATQDSPKSRSRISTAPADSGTKLSESEYKWSIRDFACNQIWAVRDDPAAVPRRYVVVNSVDPEGEIWVTFLEPNPMSADEIRWAEKGLPIACGSFKAGKTTNVLGACHFSHQVKCERSQHDSSYKKHPKKGEVWAMYKNWNCKWDQSDFTRCQYQIVEIFTDLADESEILVASLVEVPGFMTFFQRQHYNGYKLIPIPQFLSFSHQIEAFRVQTTKDRGISTPFWHLEPDSFCSLRHRSKINAA 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1666 374 ProSiteProfiles dnaJ domain profile. 21 85 IPR001623 -
Glsi11g1666 374 MobiDBLite consensus disorder prediction 116 151 - -
Glsi11g1666 374 Pfam DnaJ domain 21 82 IPR001623 -
Glsi11g1666 374 PANTHER ENDOSOME ANTIGEN-LIKE PROTEIN, PUTATIVE (DUF3444)-RELATED 1 90 - -
Glsi11g1666 374 SUPERFAMILY Chaperone J-domain 16 85 IPR036869 -
Glsi11g1666 374 Gene3D DnaJ domain 18 127 IPR036869 -
Glsi11g1666 374 Pfam Domain of unknown function (DUF3444) 161 344 IPR024593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1666 Glsi-ChrGlsi11 10444323 10445447 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1666 1 84 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 34.884 2.45e-09 56.6