Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1653 ATGTCAAGGACTCTTGCAGCAATATTAGGAGGAGCTGCAGGAGCCGTGGCATTGGTAGGGATAGCTATAGTACTTATATGGTTCTGTCTGTCTCACCAGAGAAGTGTTTCAAGGAATTCAGAGACGGGGTCGTCTGATCATTCCCAAGGAAGACCTGGTGGGATAGAGTTGACAATTCGAGATACTAGGCGTTTTGAGATGGAAGAACTATCTCTGGCCACAAAAAATTTCAGTGACAAAAATTTGATTGGAGAAGGGAAATTTGGGGAGGTTTACAAGGGGTTACTTCACGATGGGATGCTTGTAGCCATAAAAAAGCGCCGTGGACTTCCTACTCAAGAATTTGTAGATGAGGTACGCTACCTCTCAGCCATCCATCACCGGAATCTTGTAACTCTTTTGGGATACTGCCAGGAAAACAATCTACAGTTTCTTATATATGAATACGTGCCTAATGGGAGCGTCTCCAGTCACTTGTATGGAGCTGGTCAACAATCACGAGAGAAGCTAGAATTCAAGCATAGACTTCCAATTGCTCTAGGCGCAGCTAAAGGTTTGGCTCATCTTCATTCTTTGAGCCCTCGTTTGGTGCATAAGAATTTCAAAACAGCCAATGTTCTTGTGGATGAGAACTTCATTCCTAAGGTTGCTGATGCAGGACTTCGTAATTTCTTGGGAAGAGTTGATATTGCAGGGACATCTTCTCAAGTGGCGGCTGATGAGATATTTCTTGCTCCTGAGGTGAGAGAGTTCAGACGATTTTCTGAAAAGAGTGATGTATACAGCTTTGGGGTATTTTTGCTGGAACTGTTAAGCGGGAAGGAAGCAACAGAATCACCATCTTCAGACTTGAATCAGAATCTGGTTGAATGGGTGCAAATTAATCAAGACCCTCGCATTATGTCTAACGTAATTGATAAGAGATTGGGGAGTAGTTTTACAGCTGAAGGCATGGAGGAGTTCATCCTGCTGATAATTCGATGTTTAGATCCTTCGAGTGAGAGGCGACCTTCCATGAGCTATGTGGTAATGGAACTTGATCGAATTCTCGAGAAAGAAATGAAGTTGACAACAATCATGGGTGAAGGAACCCCAACTGTCACGCTTGGAAGTCAGTTATTTAAAGCAATCAGATGA 1137 0.4327 MSRTLAAILGGAAGAVALVGIAIVLIWFCLSHQRSVSRNSETGSSDHSQGRPGGIELTIRDTRRFEMEELSLATKNFSDKNLIGEGKFGEVYKGLLHDGMLVAIKKRRGLPTQEFVDEVRYLSAIHHRNLVTLLGYCQENNLQFLIYEYVPNGSVSSHLYGAGQQSREKLEFKHRLPIALGAAKGLAHLHSLSPRLVHKNFKTANVLVDENFIPKVADAGLRNFLGRVDIAGTSSQVAADEIFLAPEVREFRRFSEKSDVYSFGVFLLELLSGKEATESPSSDLNQNLVEWVQINQDPRIMSNVIDKRLGSSFTAEGMEEFILLIIRCLDPSSERRPSMSYVVMELDRILEKEMKLTTIMGEGTPTVTLGSQLFKAIR 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1653 378 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 14 354 IPR047117 -
Glsi11g1653 378 Gene3D Phosphorylase Kinase; domain 1 52 149 - -
Glsi11g1653 378 FunFam Protein kinase superfamily protein 150 363 - -
Glsi11g1653 378 Pfam Protein tyrosine and serine/threonine kinase 81 346 IPR001245 GO:0004672|GO:0006468
Glsi11g1653 378 FunFam Protein kinase superfamily protein 43 149 - -
Glsi11g1653 378 SUPERFAMILY Protein kinase-like (PK-like) 62 355 IPR011009 -
Glsi11g1653 378 Gene3D Transferase(Phosphotransferase) domain 1 150 363 - -
Glsi11g1653 378 ProSiteProfiles Protein kinase domain profile. 77 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g1653 378 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1653 Glsi-ChrGlsi11 10335121 10337322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1653 2 352 Receptor kinase-like Gene Family AT1G79620 35.674 4.47e-62 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Glsi11g1653 PK_Tyr_Ser-Thr 7.8e-41 CL0016