Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1618 ATGATGGAGCATGTGCGCGTCTCTGTCACGCACGGTTGTAATGGTACTGCTCCCGACTTACCTACTTGCAAAAGTGAAGGCCAACACCGATATATTGCAGAGGCAAAAAGGATGGGGAACCTTTACCAAGAAGCTCCGGCTACTCTGCCTCAAGACCTAAAGGTGAATATCCACCAATCGTCCATGGTTTTTCCATCCAAAGAAACACACAGAAAATCCTTGTTCTTGTCAAACATAGACAAAGCCCTCAATTTCGACGTAGAAACTGTTCACTTCTTCGCATCCCATAAGGATTTCCCTCCCCACTTAGTAGCGGACAAGTTCAAGAACGCTCTAGTTGATGCTTTAGTGGCTTATGACTTCTTAGCCGGAAGACTCGGGCACAACTCTGAAACGGGGCGGTTGGAGATAGACTGCAACGGAGCCGGGGCTGGTTTTGTGGTGGCTTCTAGTGACTATAAATTGGATCAGATAGGGGACCTGGTTTATCCTAATCCAGCTTTTGCACAGCTAGTTTATAAGAATAAGGATTTTCTTAAACCAGGTGATCATCCGGTGTGCGTTGTCCAGCTAACATCCTTCGAGTGTGGTGGTTTTGCAATTGGCTTCTCAACCAGCCATACCACCTTTGATGGGCTTAGCTTCAAATTATTCTTGGAAAATCTTGCTGCCTTGGCTGCTAACAAGCCCTTGGTTGCGACACCTTGCCACGACAGGCAACTCTTGGCCGCTCGAACTCCGCCGCATGTCGGCTTCCCCCACCCTGAGTTGCTCAATGTGGGTAACCTCCCCGACTCTGGTGTCTTTGAACCCTCCTCTGAGGAACTTGATTTCAAGATCTTCCAGTTAACCTCTAACAACATCACTGATCTCAAAGAGAAGGCTAAGGCCACCGGAGGCCGGAAATCCACCGCCCGTGTCACCGGCTTTAACGTGGTGACTGCTCATGTATGGAGGTGCAAGGCGTTATCTGGAGCAGATGATCCCAATCGGTCATCAACTATACTATTTGCTGTGGACATAAGGTCAAGGTTGAATCCTCCGCTTCCGAAATCGTATGCCGGGAACGCGGTGCTAACTGCATATGCGACAGCAAAGTGTAAGGAACTGGAACAAGGGCCATTCTGTAGCTTGGTGGAGATGGTGACTGAGGGTGCAATTCGAATGACAGATGAGTACGCGAGGTCTGCTATAGACTGGGGGGAGTTATACAATGGGTTTCCAAATGGGGAGGTGCTGGTGTCATCGTGGTGGAGATTAGGGTTTGCAGAGGTGGAGTATCCGTGGGGGAAACCCAAGTATAGTTGTCCTGTGGTGTATCACAGGAAGGATATCATACTGCTGTTTCCTCCTATTGAAGTGGGTGAAGGTGGCGATGATGGTGTGAATGTTTTGGTGGCTCTTCCTCCTAAGGAAATGGAAAAATTCCAGAGCCTCTTCTACAAGTTCTTGAATACATATGATTGA 1467 0.4847 MMEHVRVSVTHGCNGTAPDLPTCKSEGQHRYIAEAKRMGNLYQEAPATLPQDLKVNIHQSSMVFPSKETHRKSLFLSNIDKALNFDVETVHFFASHKDFPPHLVADKFKNALVDALVAYDFLAGRLGHNSETGRLEIDCNGAGAGFVVASSDYKLDQIGDLVYPNPAFAQLVYKNKDFLKPGDHPVCVVQLTSFECGGFAIGFSTSHTTFDGLSFKLFLENLAALAANKPLVATPCHDRQLLAARTPPHVGFPHPELLNVGNLPDSGVFEPSSEELDFKIFQLTSNNITDLKEKAKATGGRKSTARVTGFNVVTAHVWRCKALSGADDPNRSSTILFAVDIRSRLNPPLPKSYAGNAVLTAYATAKCKELEQGPFCSLVEMVTEGAIRMTDEYARSAIDWGELYNGFPNGEVLVSSWWRLGFAEVEYPWGKPKYSCPVVYHRKDIILLFPPIEVGEGGDDGVNVLVALPPKEMEKFQSLFYKFLNTYD 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1618 488 Gene3D - 49 258 IPR023213 -
Glsi11g1618 488 Gene3D - 266 483 IPR023213 -
Glsi11g1618 488 Pfam Transferase family 53 481 - -
Glsi11g1618 488 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 60 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1618 Glsi-ChrGlsi11 10125478 10128515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1618 53 483 Monolignol Biosynthesis Gene Families AT5G48930 30.684 5.98e-55 188