Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1614 ATGGAGATGATTCCGGCAAAATACAAACACATGATGGGTGGGCCTTCTTTGAAAGTTGACTTGCATACCGGAGCTGTTGCAGAAGGGGTCCTGACATTTCTGATTACTTTCGCTGTTCTTTTCATCATACTAAGGGGTCCTCGCAGCGAGTTTTTCAAGAATTGGTTGATGGCTGTGTCAACCGTGGTTTTGTCTTTTGGTTGGGCATACTTGGACAATTGGCATAACACATGGGATCAATTCTACGTTTACTGGATTTGCCCCTTCATTGGAGCAATATTGGCTGCCTGGCTGTTTCGTGTTGTAGAGCTGGAGCCTCTACAAGAACCCAAGCAGTTGAAGGGTCCCCCTGCCGCTGTCAACGGTCAGATCCGGTATCGATCGCCATCTTCGGCGGAACTCTTTGAAGGTCAGGCCGGCAATTCTCCGCCCTCCAGTTCCTCCGATCAGCACCTCCCCGAATTCGAATCCAGCAAAATGCTCAAGCGTCCCGGCCGTCAAGAGTCCTTCTCCGATAAGATCTACAGGTTTCGCGGCGTTTTGTTAGTGGTCTCGGTCCCACTCCTTCTCATCACTTTTGTACTCTACTTAATGCCTGCAACCTCTTCCAACCAGTCCATAGAGGACTATGCTCTCACTCATCGTAAAATGTCTCCCAATCAGAAACCATCTAACTCTTATGCGGTCATCTTCGATGCCGGTAGTTCTGGCAGCCGTGTCCATGTCTTCCATTTTGACCGGAACTTAGATCTCGTTCACATTGGCAAAGATCTTGAGCTTTTCCTGCAGATTAAACCTGGTTTAAGCGCGTACGCGCAAAATCCACAGCAGGCAGCGGATTCTCTAATTTCCCTTTTAGATAAAGCGGAAAGTGTTGTTCCCCGGGAGTTGCGACCCAAAACACCTGTTAGAGTTGGGGCAACTGCAGGTTTGAGGGCTTTGGAAGGGGATGCTTCTGATAGAATATTGCAAGCGGTCAGGGATTTGCTCAAGGACAGAAGTACTCTAAAATCTGAGCCTGATGCAGTTACTGTGCTAGATGGAACCCAAGAAGGTGCCTTTCAATGGGTTACTATTAACTATCTTTTGGGAAACTTGGGAAAAGAGTATTCAAAGACAGTTGGAGTGGTTGATCTTGGAGGTGGATCTGTTCAAATGGCCTATGCCATCTCAGAGACAGATGCTGCTAAGGCTCCTAAAGGATCAGATGGAGAAGATCCATACGTCAAGGAGATGTTCTTGAGGGGAAGGAAATATTACCTCTATGTTCACAGTTATTTGCGATATGGTTTACTAGCAGCTCGTGCAGAGATTTTTAAAGTTTCTGATGAATCTGGCAACCCTTGTGTCTTAGCTGGCTTTGATGGGTCTTACAAATATGGAGGAAAGTCATTTAAGGTCTCAGCCTCCCCTTCTGGTGCAAGCTTGAGTGAATGCAAAAGTATAGCTTCGAAGGCTCTCAAAGTTAATGAGTCAACTTGTACACATATGAAGTGCACCTTCGGTGGGATATGGAATGGTGGAGGGGGGGATGGACAGAAAAATCTTTTTGTTGCCTCGTTTTTCTTTGACCGGGCTGCCGAGGCGGGCTTTGCTGATCCAAACTCACCCATTGCCAAAGTTCATCCTGTGGATTTTGAGGATGCAGCTAAGCGAGCTTGTGAAACAAAACTTCAAGATGCCAAATCAACCTATCCACATGTTGAGGAGGGGAACCTTCCATTTATTTGCATGGATCTTGTATATCAGTATACATTGCTCGTGGATGGATTCGGCCTAGATCCATGGCAGGAGATTACATTGGTGAAGAAAGTTAAATATAATGATGCTCTTGTTGAAGCAGCATGGCCCCTAGGCAGCGCTATAGAAGCTGTATCATCTACGTAG 1887 0.4648 MEMIPAKYKHMMGGPSLKVDLHTGAVAEGVLTFLITFAVLFIILRGPRSEFFKNWLMAVSTVVLSFGWAYLDNWHNTWDQFYVYWICPFIGAILAAWLFRVVELEPLQEPKQLKGPPAAVNGQIRYRSPSSAELFEGQAGNSPPSSSSDQHLPEFESSKMLKRPGRQESFSDKIYRFRGVLLVVSVPLLLITFVLYLMPATSSNQSIEDYALTHRKMSPNQKPSNSYAVIFDAGSSGSRVHVFHFDRNLDLVHIGKDLELFLQIKPGLSAYAQNPQQAADSLISLLDKAESVVPRELRPKTPVRVGATAGLRALEGDASDRILQAVRDLLKDRSTLKSEPDAVTVLDGTQEGAFQWVTINYLLGNLGKEYSKTVGVVDLGGGSVQMAYAISETDAAKAPKGSDGEDPYVKEMFLRGRKYYLYVHSYLRYGLLAARAEIFKVSDESGNPCVLAGFDGSYKYGGKSFKVSASPSGASLSECKSIASKALKVNESTCTHMKCTFGGIWNGGGGDGQKNLFVASFFFDRAAEAGFADPNSPIAKVHPVDFEDAAKRACETKLQDAKSTYPHVEEGNLPFICMDLVYQYTLLVDGFGLDPWQEITLVKKVKYNDALVEAAWPLGSAIEAVSST 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1614 628 SUPERFAMILY Aquaporin-like 10 107 IPR023271 -
Glsi11g1614 628 Pfam GDA1/CD39 (nucleoside phosphatase) family 222 627 IPR000407 GO:0016787
Glsi11g1614 628 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 171 627 IPR000407 GO:0016787
Glsi11g1614 628 Gene3D - 227 622 - -
Glsi11g1614 628 MobiDBLite consensus disorder prediction 134 164 - -
Glsi11g1614 628 MobiDBLite consensus disorder prediction 134 154 - -
Glsi11g1614 628 Gene3D Glycerol uptake facilitator protein. 3 111 IPR023271 -
Glsi11g1614 628 Gene3D Exopolyphosphatase. Domain 2 347 606 - -
Glsi11g1614 628 CDD NBD_sugar-kinase_HSP70_actin 229 388 - -
Glsi11g1614 628 FunFam Apyrase 1 347 606 - -
Glsi11g1614 628 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 346 361 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1614 Glsi-ChrGlsi11 10102435 10109426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1614 165 627 Calmodulin-binding Proteins AT3G04080 70.194 0.0 647