Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1612 ATGGAGATGACACTTGTTGTGAAGTGGGACGGCAATGGGCTCCAATCCACAAGCGAAGAAAGTAGGCTTGAAAATGGTCAAACCCCATTTCTCACCTGTGACCCCCCTACCACAAGAACAGAAGAAGCGGCGCATCCTCACTCAGGGGGTCCACTCGCTTTGTGGTATTTGGACATTGACAATGACGTTGCGTCACAGGAGACAGCCAACCATAATGCCGGGGATCCATTTATGACTTACGAGCAACCTAAAGCTGTCAACCTCATGCCTGCAAGCTCTTACTTGCAGTTTCAAGACCGCTATCCTCTAACTCATCGTAAAGTGTGGCCCATTCAGAAATCCACTACCTCCTACGCAGTGATATTCGATGCCGGTAGCACTGGTAGCCGCGTGCATGTGTTCCACTTCAACCAGACCTTAGATCTGCTTCCAATTGGCGAAGATCTTGAGCTTTTCGACAAGATTACACCGGGTTTGAGTGCATACGCTTCGAATCCGGAGCAAGCCGCAGAATCTCTGATTCCCCTTTTAGAAAAAGCCGAAAGTGTTGTCCCCCGAAGGTTGCGTCCCAACACACCCCTCAGGCTCGGGGCAACCGCAGGTTTGAGGGCTTTGAAAGGGAATGCTTCTGAATTGATCTTAGAAGCGGTTAGGGATCTGTTCAAGAACAGAAGCACTCTAAAACTCGAGTCAGAAGCAGTTGCTGTTATTGATGGAACCCAGGAAGGCTCTTTTCTATGGGTGGCAATTAACTATCTATTGAGTAACTTAGGAAGTGAGTATTGGGAGACAGTAGGAGTGGTTGATCTTGGAGGTGGATCTGTTCAAATGGCCTATGCTATCTCAGAAGCAGATGCTGCAAAGGCTCCAAATACCCCCGAAGGAGACGACCCATACATAACTGAGATGTACCTCAGGGGAACCAAATATTACGTCTATGTTCACAGTTACTTGCACTATGGTAAGGAAGCATCTCGTGCAGAGATGTTAAAGGTTTCCGGTGACTCTGACAACCCTTGTATTTTAGCCGGCTTTCATGGGTCTTACGAATATGGAGATGTGGAGTATAATGTCTCATCCCCCCCTACTGGATCAAGCTTCAACGAATGCAGAAACACAGTTCTTAAGGTGCTCAAAGTTGATGAGGCATGTGCATATAAGAATTGCACTTTTGGTGGGATATGGAATGGCGGAGGAGGAGGAGGACAGAAAAACCTTTATCTTGCCTCATCTTTTTATTACTTGGCTACTGAGGCTGGTTTTGCTGATATAAACAAAGCCAGCGACAAAGTTCGCATCGTGGATTATAAGATTGCAGCTGAGGTTGCTTGTAAAACAACATTCAAGGATGCCAAATCCACTTTTCCACTGATTGAGGATGATGTGCTTCAATATTTATGCATGGATCTTGTATACCAGTATACACTGCTAGTTGATGGATTTGGCCTAGATCCATGGAAAGAGGTTACAGTGGTGAAGCAAGTGGAATATCAAAATTCGCTGGTGGAAGCAGTTTGGCCCCTGGGCAGCGCCATAGAAGCCGTATCATCTTTACCTAAATTTGAGCGATTCATGTCAACAAGTTACCCGGTAAGTACAAGGGCATGTGCTGGGAATAATCCTCTGAAAATTCCCGTTTGCTTTTTCTTATCCCCACAGCAGACACAATACCCAAATGCAAATCTAAGCAAAGGTGTTGCCCCAAAACAGTATGGAGACCCGCACACGGTGTCCTCATCCTATAAAAGCATCTTTGAAGATAATTATCGGAGTCCAAAGAGTTGTGGATAA 1791 0.4595 MEMTLVVKWDGNGLQSTSEESRLENGQTPFLTCDPPTTRTEEAAHPHSGGPLALWYLDIDNDVASQETANHNAGDPFMTYEQPKAVNLMPASSYLQFQDRYPLTHRKVWPIQKSTTSYAVIFDAGSTGSRVHVFHFNQTLDLLPIGEDLELFDKITPGLSAYASNPEQAAESLIPLLEKAESVVPRRLRPNTPLRLGATAGLRALKGNASELILEAVRDLFKNRSTLKLESEAVAVIDGTQEGSFLWVAINYLLSNLGSEYWETVGVVDLGGGSVQMAYAISEADAAKAPNTPEGDDPYITEMYLRGTKYYVYVHSYLHYGKEASRAEMLKVSGDSDNPCILAGFHGSYEYGDVEYNVSSPPTGSSFNECRNTVLKVLKVDEACAYKNCTFGGIWNGGGGGGQKNLYLASSFYYLATEAGFADINKASDKVRIVDYKIAAEVACKTTFKDAKSTFPLIEDDVLQYLCMDLVYQYTLLVDGFGLDPWKEVTVVKQVEYQNSLVEAVWPLGSAIEAVSSLPKFERFMSTSYPVSTRACAGNNPLKIPVCFFLSPQQTQYPNANLSKGVAPKQYGDPHTVSSSYKSIFEDNYRSPKSCG 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1612 596 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 237 252 IPR000407 GO:0016787
Glsi11g1612 596 MobiDBLite consensus disorder prediction 9 30 - -
Glsi11g1612 596 Pfam GDA1/CD39 (nucleoside phosphatase) family 113 520 IPR000407 GO:0016787
Glsi11g1612 596 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 99 518 IPR000407 GO:0016787
Glsi11g1612 596 MobiDBLite consensus disorder prediction 10 30 - -
Glsi11g1612 596 Gene3D Exopolyphosphatase. Domain 2 238 496 - -
Glsi11g1612 596 CDD NBD_sugar-kinase_HSP70_actin 120 279 - -
Glsi11g1612 596 FunFam Apyrase 1 238 496 - -
Glsi11g1612 596 Gene3D - 118 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1612 Glsi-ChrGlsi11 10091616 10098990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1612 89 517 Calmodulin-binding Proteins AT3G04080 57.907 1.73e-166 481