Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1575 ATGAGGAGGGAAGACTCGAAAGAGAAAAAGGGAGAGGAGGCTTTGTGGGAGGATTTAAATGGCGGGGAGATGCTTTTTCTCAAGTTGCTTATCCTGCGGTTATTTAAGGGTTTCACTACTGTTTACTCTGACCTCATTCCCAGGTGGTCTTTAATAGCTGGGAGAATACCAGGAAGGACAGGCAATGAGATAAAGAACTACTGGAATACCCATCTCAGCAAGAAGCTCATAAGACAAGGCATAGATCCAAGGACCCACAAGCCATTAATCACAACCAATCCCAATTCCCACAAGCTTGATCACGAACCAAATACAACATCAAATCCTCCTTCAATGCCCCAAACTAGTAGTATTAATAATCCTGCAACAGACATGGGCAGCAGCAGCCAAATAAACGCTATGAAGTATTGTCAAAATATGGAAGGACATAATAGCAGTACAAAAAATTGGCCGAGCTGTGACTATGTGATGAGTCAAGACAAGAATATTTGCGAGGAAGATACGCTCTCTTCGTTTATGGATTCCTTGCTCAATGACAACGAAGTGGCCGGTAATGTGATTACGGCATCACCACATCCTATAACTTCTTCCATGCAGTCTTTGGATCTTGGCTTGTGGGAGGTTGAATTGACAAGTACAGCAGATGCTTTGGGGGATGAACAATTTGGTTCCTTGTTTAAGTAA 684 0.4284 MRREDSKEKKGEEALWEDLNGGEMLFLKLLILRLFKGFTTVYSDLIPRWSLIAGRIPGRTGNEIKNYWNTHLSKKLIRQGIDPRTHKPLITTNPNSHKLDHEPNTTSNPPSMPQTSSINNPATDMGSSSQINAMKYCQNMEGHNSSTKNWPSCDYVMSQDKNICEEDTLSSFMDSLLNDNEVAGNVITASPHPITSSMQSLDLGLWEVELTSTADALGDEQFGSLFK 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1575 227 MobiDBLite consensus disorder prediction 86 126 - -
Glsi11g1575 227 CDD SANT 48 72 IPR001005 -
Glsi11g1575 227 MobiDBLite consensus disorder prediction 85 126 - -
Glsi11g1575 227 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 48 161 - -
Glsi11g1575 227 Gene3D - 28 105 - -
Glsi11g1575 227 SUPERFAMILY Homeodomain-like 42 82 IPR009057 -
Glsi11g1575 227 ProSiteProfiles Myb-like domain profile. 48 72 IPR001005 -
Glsi11g1575 227 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 47 76 IPR017930 -
Glsi11g1575 227 Pfam Myb-like DNA-binding domain 48 72 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1575 Glsi-ChrGlsi11 9883178 9885688 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1575 30 202 MYB Transcription Factor Family AT3G13540 40.571 3.74e-28 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi11g1575 Myb_DNA-binding 3.9e-06 CL0123