Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1570 ATGACAATCGTGTCGTGTTCCGGTGGCGTTAGAGCACCGCAAAAGAGCGACATGGTCAGTGTCCACTGTTCTTACAGAGTCATCCCTTCTGAGTCGACGCCCACTGGAAAATTCCCCTTGTCCCACTGCGACCAAATCAAGCTCCCCGCTCATGGATCTATTCTTGTTGTTTACACACCCGCCTGCACTCATACTGCGACTGGGATGTTTGTGATTGACACTCTGAGGACTTCTCTCAGCAAAGTATTGACTCACTACTATCCCCTTGCTGCTCGATTATGCTGGATCCAGGGTGGTCGTTGGGAACTCCATTGCAATGCCCAGGGAGCGCAACTCTTGGATGCCAATTGTCAAGTCAATTTGGTTGATTTGGGTGATTTTGTGCCCACCCAAATTGTGGAACAACTCCTGCCCAAGGTTGATTATGGATGCCCAATCGAAGAGATACCTTTGCTGGTGGCGCAGCTAACCAGATTCCCATGTGGTGGTCTTACTCTGGGAGTGGCCTTATGTCGTGCTTTGGTTGATGGGTCGGCTGTCGCGAGTTTCATGAACTCATGGGCCAAGTTGGCCAGGGGAGAAAAACTAGATCCGAACGAGATGCCATTCCTTGATCGAACTTTGTTAAATTCCCGCAAACTACATATGGAGCCGCGCTTTGTTCATTCTGAGTTTCACCCTCCACCCCTTTGGGCAAGTAGCCTGGTAGACACCAAGGATGAGGCTGATGCTGCCATTTTAAAACTCACCGAAGACCAAGTTCAGAAACTGAAGAGGAAAGCCAGTGATTTTGGCAGTACAAACGCGGCAATTTCTCCACATCGACCTTATACTAGTTTTGAGGTAATAGCTGGGCACTTGTGGAGGTGCGTTTGCAAGGTACGGTATGCGGGCAATGGTAACCAGCAAACAAGATTCTCCTCCTTGGTCAACTGTAGAAGCCGATTGAGCCCACCCCTTCGTAATGATTTCTTCGGGAATGCAACCTTTCCTACTGCGACCCCAACTTGCTCCTTTGATGACCTTATACACAAGTCTCTGAGTTATGCCGTTAGGAATATAAGGCAGGCAATTGACACGATGACAGATGAGTATGTAAGGTCATCTCTTGATTATATAGCAAATCAAAAGGACTTGAATTTGTTAAGGAACACTTTCCACTCCCCTACAGTTAGCCTAGAAGGGCAATTTAGGGGAAACCCAAATCTGTTTCTTGTTAGTTGGATGAACTTTCCGTTTTATGGCACAGATTTTGGGTGGGGAAAGCCTGTTTATTTGGGACCAGGGCCAATAAAGTCTGATGGGAAGGCTTTCCTTATGAATAATGGAAATGGTGATGGCTTCATTGTAGCCATTTGTTTGCAACCATCCCATATAGATGTCCTGAAGAAGTTGTTTTATGAGGATATAGGGGAGATATCGTCAACTTCCAAACTATGA 1440 0.4681 MTIVSCSGGVRAPQKSDMVSVHCSYRVIPSESTPTGKFPLSHCDQIKLPAHGSILVVYTPACTHTATGMFVIDTLRTSLSKVLTHYYPLAARLCWIQGGRWELHCNAQGAQLLDANCQVNLVDLGDFVPTQIVEQLLPKVDYGCPIEEIPLLVAQLTRFPCGGLTLGVALCRALVDGSAVASFMNSWAKLARGEKLDPNEMPFLDRTLLNSRKLHMEPRFVHSEFHPPPLWASSLVDTKDEADAAILKLTEDQVQKLKRKASDFGSTNAAISPHRPYTSFEVIAGHLWRCVCKVRYAGNGNQQTRFSSLVNCRSRLSPPLRNDFFGNATFPTATPTCSFDDLIHKSLSYAVRNIRQAIDTMTDEYVRSSLDYIANQKDLNLLRNTFHSPTVSLEGQFRGNPNLFLVSWMNFPFYGTDFGWGKPVYLGPGPIKSDGKAFLMNNGNGDGFIVAICLQPSHIDVLKKLFYEDIGEISSTSKL 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1570 479 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 27 459 - -
Glsi11g1570 479 Pfam Transferase family 18 467 - -
Glsi11g1570 479 Gene3D - 234 469 IPR023213 -
Glsi11g1570 479 Gene3D - 15 227 IPR023213 -
Glsi11g1570 479 SUPERFAMILY CoA-dependent acyltransferases 35 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1570 Glsi-ChrGlsi11 9862950 9864389 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1570 19 468 Monolignol Biosynthesis Gene Families AT5G48930 36.564 4.17e-87 272