Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1557 ATGGCAAAAGAATTCCACCCTTCCCTGCTTCTGGTTTTGGCAACAACTTTACTTTGTATCTATCAGTCGGAGCAGCTGCAATCTTCCCAGTTTCAGACCCTTCTGAAAATTCAACAACTTTTGAGCTTCCCTGCTGTTTCAAGCAGCTGGAATAACAACACAAACATCTGCAACAGTGATTCAAATTCTTCTCTCACTGTTGTATGCTATGAAGACACCATAACCCAGCTGCATATAATAGGCGGAAAAACAACTCCGTTGCATCCTCGAAATTTCTCAATAGATTCCTTTGTCACAGCACTGGTTACACTTCCCAATTTGAAAGTCCTCACGCTGGTTTCTCTTGGTTTATGGGGTCCATTGCCTGGTAAAATTGCTCATCTGTCATCACTGGAAATAGTTAACATGAGCTCGAATTTTCTATACGGGAACATCCCTCAGGAGCTTTCTTCACTATCGAATCTTCAAACACTCATTCTTGATAAAAATATGTTCGCTGGTCAGCTTCCAGATTGGTTGGATTCATTTCCAGCCTTAACAGTGTTAAGTTTGAAAAATAATTTGTTCAACGGGTCTTTGCCTAATTCATTGGGTAGCTTGGAAAATCTGAGAATTCTTTCACTTTCCCATAATCACTTTCATGGAGTGGTACCTGATTTGAGCCGTTTGACGAATCTTCAAGTGCTGGAATTGGATTATAATGCTTTTGGACCTCAGTTTCCTCGACTTGGTAACAAGTTGGTTACTCTCGTATTAAGAAACAATAGCTTTAGGTCTGGCATACCTTCTGAAGTGAGCTCATATTATCAGCTTGAGAGACTGGATATCTCATCAAATACATTTGTGGGGCCATTTCAGCCAGCATTATTATCTCTTCCTTCTATTACTTACCTGAACATTTCTGGAAACAAATTAACTGGGATGATTTTTGAGGATCTATCTTGCAATTCAGAACTTGAATTCGTAGATTTATCATCAAATCTTTTGACAGGCAGCTTACCAAAATGTTTACTGTCAAATCCCAGTTATAGAACTGTCCTTTATGCTGGAAATTGTCTAGATGATGCGAATCAGAATCAGCTACCACCACCCTTTTGCCACACTGAAGCCTTAGCAGTCGGGATATTGCCAGAGAGAAACAAGCACAAACGATTATCCAAGTTAGTCCTTTACCTTGGAATAGCAGGTGGGACTCTTGGAGGAGTAGCACTTCTTCTGATGATTCTCTTTGTCATTAAAAGAGGAAATGCCAAAAGCAAAATGAAGAATCCTCCAACAAGATTCATATCTGAGAATGCAGCTTCTGGATACACCTCTAAGTTGCTTTCTGATGCAAGGTATATATCTCAGACAATGAAGTTGGGAACTGGCCTGCCAACGTATCGAACTTTCTCACTGGAGGAGATTGAGGCAGCTACAAACAACTTCGACACAGCTTCTTTCATGGGTGAAGGTTCTCAGGGGAAGATGTACAGAGGTCAGCTGAAGAATGGTTCGCTTGTTGCTATTAGATGTGAAAAAATGAGAAAAAGATACAGTACGCAAAACTTTATGCAGCACATAGAGCTGATATCAAAACTTAGGCATCGTCATTTAGTCAGTGCTCTTGGACACTGCTTTGAATGTTGCTTGGATGATTCAAGTGTCAGCAGGATATTTCTTGTCTTCGAATATGTACCAAATGGCACTCTCAGGAGCTGGATCTCTGATGAACATCCTACAAAATCACTTAGTTGGACCCAACGCATAGCAGCTGCAATTGGAGTAGCAAAGGGCATCCAGTTTTTGCATACAGGGATTCTCCCTGGTGTATATTCAAACAATCTCAGAATAACAGATGTTTTATTAGATCAGAACCTTGCAGCAAAAATTAGCAGCTATAATCTGCCTTTGTTATCTAACGTGGGAAAGGTTGGCCATGGAAATCCTTCCGGTAAATCCAAGAGTCCTAGCGTTAACACAAGTGTAAAACATGAAGATAAATCTGATATATACGACTTTGGAGTAATATTACTGGAAATCATTCTTGGACGGACAATGAAGTCAACTAGTGATGTAGACGCTTTAAAGAATCTGCTTCAAGCAAGCATAGTAGCTGACGATGATGTTCGGAGGAGCGTAGTAGATCCAGCAGTTCGAAAGTCATGCTTGGATCAATCAGTGAAGACAATGATGGAGATCTGCGTGAGGTGCCTGGTAAAAGAACCAGCAGACAGGCCTTCTATTGAGGATGTGTTGTGGAATTTGCAGTTTGCTGCTCAAGTTCAGGATGCTTGGCGAGGCGACTCTCAAAGTAGTGAGGGATCTCCAGGCTCGCCTTTAGAGCCTCAACGACTAGCCTTCTATTAA 2349 0.4112 MAKEFHPSLLLVLATTLLCIYQSEQLQSSQFQTLLKIQQLLSFPAVSSSWNNNTNICNSDSNSSLTVVCYEDTITQLHIIGGKTTPLHPRNFSIDSFVTALVTLPNLKVLTLVSLGLWGPLPGKIAHLSSLEIVNMSSNFLYGNIPQELSSLSNLQTLILDKNMFAGQLPDWLDSFPALTVLSLKNNLFNGSLPNSLGSLENLRILSLSHNHFHGVVPDLSRLTNLQVLELDYNAFGPQFPRLGNKLVTLVLRNNSFRSGIPSEVSSYYQLERLDISSNTFVGPFQPALLSLPSITYLNISGNKLTGMIFEDLSCNSELEFVDLSSNLLTGSLPKCLLSNPSYRTVLYAGNCLDDANQNQLPPPFCHTEALAVGILPERNKHKRLSKLVLYLGIAGGTLGGVALLLMILFVIKRGNAKSKMKNPPTRFISENAASGYTSKLLSDARYISQTMKLGTGLPTYRTFSLEEIEAATNNFDTASFMGEGSQGKMYRGQLKNGSLVAIRCEKMRKRYSTQNFMQHIELISKLRHRHLVSALGHCFECCLDDSSVSRIFLVFEYVPNGTLRSWISDEHPTKSLSWTQRIAAAIGVAKGIQFLHTGILPGVYSNNLRITDVLLDQNLAAKISSYNLPLLSNVGKVGHGNPSGKSKSPSVNTSVKHEDKSDIYDFGVILLEIILGRTMKSTSDVDALKNLLQASIVADDDVRRSVVDPAVRKSCLDQSVKTMMEICVRCLVKEPADRPSIEDVLWNLQFAAQVQDAWRGDSQSSEGSPGSPLEPQRLAFY 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1557 782 SUPERFAMILY Protein kinase-like (PK-like) 456 751 IPR011009 -
Glsi11g1557 782 Gene3D Ribonuclease Inhibitor 245 362 IPR032675 -
Glsi11g1557 782 Gene3D Transferase(Phosphotransferase) domain 1 560 759 - -
Glsi11g1557 782 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 393 760 - -
Glsi11g1557 782 Gene3D Phosphorylase Kinase; domain 1 448 558 - -
Glsi11g1557 782 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 450 558 - -
Glsi11g1557 782 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 27 245 - -
Glsi11g1557 782 SUPERFAMILY L domain-like 44 353 - -
Glsi11g1557 782 MobiDBLite consensus disorder prediction 760 782 - -
Glsi11g1557 782 ProSiteProfiles Leucine-rich repeat profile. 202 224 IPR001611 GO:0005515
Glsi11g1557 782 FunFam Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 246 371 - -
Glsi11g1557 782 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 559 765 - -
Glsi11g1557 782 ProSiteProfiles Protein kinase domain profile. 476 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi11g1557 782 Pfam Protein tyrosine and serine/threonine kinase 481 746 IPR001245 GO:0004672|GO:0006468
Glsi11g1557 782 Gene3D Ribonuclease Inhibitor 27 244 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1557 Glsi-ChrGlsi11 9764135 9768751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1557 43 770 Miscellaneous Gene Families AT3G03770 65.306 0.0 919
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Glsi11g1557 PK_Tyr_Ser-Thr 7.5e-24 CL0016