Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1556 ATGGCTGAGCCACAAGGTGACGGCACTTTTGGAACTAGACGAAAAGGAACGGCTGCAAAGCGTGCTGTGGCGGCAGCAGCAGTGGCGTCACCGGCACCTCCCTCCCGCTTTGCAGCTGTGCACAAGGTGTTCGGTGCCAGCAATGTGTCAAAGCTCTTATTGCATATTCCGGTCAACCGCCGCCAGGAAGCGGCGGTTACTATATCATACGAGGCTCAAGCAAGGCTCTCTGATCCTGTTTATGGTTGCGTCTCCACCATTCTTGCTTTGCAACACCAGGTGGCATCCCTGCAAGCGGAGCTGACTATGGTGCAAACTCAGCTGATAAATAGTAGGTTTGCATTTGCAAGTGCTGTACAGAGCTCACAGCAACAGCAGCAGCAGCAGCCAAACATGAATGTAGCAATGCAGCCAGCGTACTCCAACAATTCATCTGCTTCCACCAATCTTATGAGCATGAGCAGCCTCAACCCTGCAGGTTTCGACCTTGCCTCATCCCATAGCTTAGAGCCCCTTCAACTCTCTCGGTTGTCCCAAGATGAGGAAGACGATGAGGAAGAAAGTAGGATTCCCCGTCTTTTCAACCAAGACATACTTCGTCACTGA 606 0.5198 MAEPQGDGTFGTRRKGTAAKRAVAAAAVASPAPPSRFAAVHKVFGASNVSKLLLHIPVNRRQEAAVTISYEAQARLSDPVYGCVSTILALQHQVASLQAELTMVQTQLINSRFAFASAVQSSQQQQQQQPNMNVAMQPAYSNNSSASTNLMSMSSLNPAGFDLASSHSLEPLQLSRLSQDEEDDEEESRIPRLFNQDILRH 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1556 201 Coils Coil 87 107 - -
Glsi11g1556 201 MobiDBLite consensus disorder prediction 176 201 - -
Glsi11g1556 201 Pfam Lateral organ boundaries (LOB) domain 31 105 IPR004883 -
Glsi11g1556 201 PANTHER LOB DOMAIN CONTAINING PROTEIN 28 157 - -
Glsi11g1556 201 ProSiteProfiles LOB domain profile. 5 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1556 Glsi-ChrGlsi11 9761339 9762494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1556 4 188 AS2 family AT3G03760 55.276 2.67e-51 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi11g1556 LOB 1e-23 No_clan