Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1550 ATGGCAACTTTCTTCTTCTCCAACTCCAAACCTCGACCCAGAAAACTCGCTCTTTTCTTCAATATATCCTTCCTCTTCCTCCTCTCTCTCTTCCTCAAGGCCTTCCTCTACCCCTTCAATTCAAATCTTTTTCACGACCAATCTAATGGCCCGTCCACAACCATCTTTAACCGTGCTCCCATTCTCCGTGACAGCCAAGTTGATGGCTGTACCGCCCTCCACAAGTACTCAGATTATAACTCCAAGTGCCTGTACGTCAAAACCCATCTTCACTGCAGTTCAAGAGGGTACATAAACTATCTCCAAATCTTTTACTGCAGTCTTGGCCCATCCCCAATTCTCGGTCATGCTCTGCTTGTATTATGGCTTGTTATATTGTTCTATCTCTTGGGTGACACAGCTTCAAATTACTTCTGCCACTCCTTAGAAGGTTTGTCCAACGTCTTGCGGCTACCTCCCACCATAGCTGGAGTAACCCTGCTTTCTCTAGGAAATGGGGCGCCTGATTTTTTTGCTAGTTTTGTTTCGTTCACAAGATCCAGCAATGGTGTTGTTGGCCTCAATAGCATCCTCGGAGGGGCTTTTTTCGTCTCTAGTGCTGTTTTGGGGATTATAAGTATTCTGATTAGCTCAAAACAGATTAGGGTCGATAAGGCCAGTTTCATTAGGGATGTTGGCTTCTTCCTTTTCTCCCTGTTCGTCCTCTTTGTGATAATTTATATCGGTAAAATCAACTTGTTGGGCTCAATCTGCTATCTTGCTGTATACTTCCTTTATGTCTGTGCCGTCTCAGCTCCACATTTCATCTACGGAAGCAAGAAGAAGGAAAACGAGTTTGCAGTGTGTTCGGATGACTTAACATTGGCAGAGTCTGGCATACCGTTGTTGGGCTATGTTGATGATGAGAAACCAAATTTAGAAGAGAAAGTGGGTGTTGAAGATGAAGGGGAAAAGCCAGAGAGTTTTGAGGATGGTTCATTAAACTGCAATTACCTGGGCAAGTTTCTAAAAGTACTTGAATTACCTCTTTGCTTGCCAAGAAGACTTACCATACCTCTTGTGAGTGAGGAAAAGTGGTCAAAGCCATGTGCAGTTGTATCAGTCACAATAGCACCAGTTTTGTTGGCAGGTCTTTGTAATAGCCAGAGGGAAAACCTGGATTCAGTGAGCAATTTGGTTACGTACTTGACTGCTGCTTTAATTGGCATGGTTTTGGGATATATGGCATGTGTAACCACCTTGAGCTCTAGCCCACCAAGGAAGTGCTTGTTTCCCTGGCTAGCAGGGGGTTTTGCTATGAGTGTGATATGGACTTACATTATCGCTGAGGAACTGGTTTCCCTCTTGTATTCACTTGGAAACATAATCGGGGTTAATCCTTCAATTCTCGGATTAACTGTGCTAGCTTGGGGTAACTCTCTTGGGGATTTGATAGCCAATGGTGCAATGGCTCTAAACGGTGGGGCAGATGGGGCCCAAATAGCCATATCTGGTTGCTATGCAGGTCCCATGTTTAACACTTTGATGGGTTTGGGCTTGCCTCTTGTTCTCTCCGCATGGTCTGAATATCCACGCCCTTATGTGATTCCTAAAGACCCTTCCCTTTATGAGACTCTCTTGTTCACGATGGTGGGGCTGCTCTGGGCCCTTGTGATATTGCCAAAGAAGAATATGAGGCTGGATAAGTCCTTGGGAGCTGGCCTCTTGACCATATACCTCTGCTTTCTGTTCATAAGGATAGCCATGCTTATCGGTGTTCTGAAATTGTAG 1770 0.4486 MATFFFSNSKPRPRKLALFFNISFLFLLSLFLKAFLYPFNSNLFHDQSNGPSTTIFNRAPILRDSQVDGCTALHKYSDYNSKCLYVKTHLHCSSRGYINYLQIFYCSLGPSPILGHALLVLWLVILFYLLGDTASNYFCHSLEGLSNVLRLPPTIAGVTLLSLGNGAPDFFASFVSFTRSSNGVVGLNSILGGAFFVSSAVLGIISILISSKQIRVDKASFIRDVGFFLFSLFVLFVIIYIGKINLLGSICYLAVYFLYVCAVSAPHFIYGSKKKENEFAVCSDDLTLAESGIPLLGYVDDEKPNLEEKVGVEDEGEKPESFEDGSLNCNYLGKFLKVLELPLCLPRRLTIPLVSEEKWSKPCAVVSVTIAPVLLAGLCNSQRENLDSVSNLVTYLTAALIGMVLGYMACVTTLSSSPPRKCLFPWLAGGFAMSVIWTYIIAEELVSLLYSLGNIIGVNPSILGLTVLAWGNSLGDLIANGAMALNGGADGAQIAISGCYAGPMFNTLMGLGLPLVLSAWSEYPRPYVIPKDPSLYETLLFTMVGLLWALVILPKKNMRLDKSLGAGLLTIYLCFLFIRIAMLIGVLKL 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1550 589 Pfam Sodium/calcium exchanger protein 427 580 IPR004837 GO:0016020|GO:0055085
Glsi11g1550 589 Pfam Sodium/calcium exchanger protein 120 262 IPR004837 GO:0016020|GO:0055085
Glsi11g1550 589 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 22 587 - -
Glsi11g1550 589 Gene3D - 151 275 IPR044880 -
Glsi11g1550 589 Gene3D - 363 581 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1550 Glsi-ChrGlsi11 9693937 9695706 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1550 44 588 Antiporters AT5G17860 53.748 0.0 530