Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1548 ATGGGTTATATTTTGTTCTCGAACGCCTCGTTCCTCTTACTGGCTTGTCTTTTCATAATTATTCATTTCCACTCTTCAGAACTTGTTCCGAGCAACCGCGCTGCCTTAAATGGCGGCAGTCATCAGAATTGCAAGAGCTTCCAGAGCCTTGACGACTACAAAGCTAAGTGTCTGTACCTTCAATCCAATGGGCCTTGTGTCTCGCAGGGTTATATTGACTACCTTTACCTTTTTTATTGCAAATTTGGGCGATTCCCACTGTTCGGTCATATTATTCTGTTTCTTTGGCTCCTTGTTCTGTTTTATCTTCTGGCTGATACAGCTTCTGAATACTTTTGTCCTTCCCTTGAAAACCTATCCAAATCCCTCAAGCTATCCCCTACAATTGCTGGAGTGACACTCCTTTCTCTTGGAAATGGTGCCAATGACGTTTTCGCCAGCCTCGTCTCTTTCAAAGGTAGTGGGACCAGCGGCATTGGCTTTAATACAATACTTGGGGGTGCCTCCTTTGTGTCCTGTGTTGTGGTAGGAATAGCAAGCATAGCAATACGTCGCAGAAGAATTCAAGTTAAAAAATCTGCCTTTATAAGAGATGTTTGTTTTCTTCTTTTGGTTCTTCTGTGCTTGTTTACAATATTGATCCCGGGTGAGATCAATGTTTTTGGAGCAATTGGTTTTTCTTCCATGTATATAGTGTATGCAGTTGTTGTTTATGTCTCATCTGCCCGCTGGAAGGGTGTGCGGGAAGATACTGAACGGGATGGTAATTCAAGCTATGGCAGTGACTTGAGTGTGCCCCTACTCACTGTCAGTGACGTCGAAAGAGGATTACTTGATAGCGTTGAGGAAGGTGCTCGAGAATATGGCCAGAAAATTAAGAAAAAATGCGGCTGTATGAGATCTTCAATATGTGGAATGTCATTTTATGTGATGAAGATGCCCCTTTACTTTCCTAGGAGATTGACAATTCCTGTTGTCTGTGAAGAGAGATGGTCCAAGCCGTATGCAATTTCTTCAGTGGTTCTAGCACCGCTTCTCTTGTCTGCCCTGTGGATCATTTACCAGGGAAACGGCTTCTTCCACACAAGCCTGATTGCTTGTGGTATTGGATCAGTGATTGGGATTATATTAGGGATAACTGTGTTTTTCACAACCGAGCAGTCAACCCCCCCAAAGAAATACTTATTTCTCTGGCTTGCGGGCGGGTTTGTAATGAGTGTGACGTGGAGCTACATTTCAGCTCAGGAGTTGGTGGGATTGTTGGTTTCACTTGGCTATGTATGTGGGATAAGTCCTTCAATATTGGGGCTAACAGTTCTTGCCTGGGGAAACTCAATTGCGGATTTGACGACAAATTTAACAATGGCTTTAAATGGTGGACCAGAAGGTGCTCAAATAGCAATATCGGGTTGCTATGCTGGCCCCATCTTCAATATTCTCGTTGGCTTGGGACTGTCTCTTATTAGCTCTACTTGGTCCGAATACCCATCATCTGTTGTGATTCCGGTAGATCCTTATCTCTTGGAGACACTGGCCTTTTTGGCGGGTGGATTGGCTTGGGCACTTGTGGTTCTGATAAGAAGAAACATGAGGCTTGATGGACTCTTAGGAGGAGGGCTGTTAGTTATTTACTTCGTTTCTCTGCTTCTGAGGCTGATTCAGACGCTTGGGCCTCTCCAACTTCATGATATGTTGGTTTTATTGTTTCAAAGATAA 1716 0.4382 MGYILFSNASFLLLACLFIIIHFHSSELVPSNRAALNGGSHQNCKSFQSLDDYKAKCLYLQSNGPCVSQGYIDYLYLFYCKFGRFPLFGHIILFLWLLVLFYLLADTASEYFCPSLENLSKSLKLSPTIAGVTLLSLGNGANDVFASLVSFKGSGTSGIGFNTILGGASFVSCVVVGIASIAIRRRRIQVKKSAFIRDVCFLLLVLLCLFTILIPGEINVFGAIGFSSMYIVYAVVVYVSSARWKGVREDTERDGNSSYGSDLSVPLLTVSDVERGLLDSVEEGAREYGQKIKKKCGCMRSSICGMSFYVMKMPLYFPRRLTIPVVCEERWSKPYAISSVVLAPLLLSALWIIYQGNGFFHTSLIACGIGSVIGIILGITVFFTTEQSTPPKKYLFLWLAGGFVMSVTWSYISAQELVGLLVSLGYVCGISPSILGLTVLAWGNSIADLTTNLTMALNGGPEGAQIAISGCYAGPIFNILVGLGLSLISSTWSEYPSSVVIPVDPYLLETLAFLAGGLAWALVVLIRRNMRLDGLLGGGLLVIYFVSLLLRLIQTLGPLQLHDMLVLLFQR 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1548 571 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 6 559 - -
Glsi11g1548 571 Gene3D - 336 552 IPR044880 -
Glsi11g1548 571 Gene3D - 125 252 IPR044880 -
Glsi11g1548 571 Pfam Sodium/calcium exchanger protein 399 551 IPR004837 GO:0016020|GO:0055085
Glsi11g1548 571 Pfam Sodium/calcium exchanger protein 94 238 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1548 Glsi-ChrGlsi11 9682446 9684161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1548 30 557 Antiporters AT5G17850 53.184 3.14e-166 483