Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1538 ATGCTGCTCTGCTCCTTGGTGTTTCCCATTGCATTTGGTGACCTGCAGGTTGGATTCTATAGCATCATGCAGCAAATAGTACCTGAGCGATTCGACCAAAACCCATCAATAACTGCAGCTCTGCTTCGCATGCATTTTCATGATTGTTTTGTCAGGAAAAAGAAGCTAGTCCCAACAAAAGCGTTCGCGGATTTGATCTTATTGACAAAATCAAGGAAAGACTGGAAACTTAAATGTCTGTCAACAGTTTCCTGTGCAGATATCTTAACAATTGCCACCAGAGATGCTGTGGCTCTATCTGGTGGACCCAAATATGATGTTCCCACAGGCAGACTTGATGGGCTAGTTTCTCTTGAGAAGGACTTCACACCACCTGAAATGGTGGCGGCACTCATGGGTGCACACGCAATTGGTATTGCTAAGTGTGGGTTTTTCTCGGAGAGACTTTCAGATGCCACCGTCGACCCTCCTCTGCGTGATCAGCTGATGCGGTCATCTCCGCGGCCTGCACCTAACACGAGCAGAGTCCTTTGTGGCCTGCTTCGCCAAAATAAGGCGGTGGTGATGCGCATCTATACTCGTATGGATTCTACCAAGAATGAGCCCTCAAAGAAAGACACGGGTCCAAATTTAAGTGTTGAAGTAAAGGCTAGAAGCTGGATGCCCCTTAACAAGTTCCTGTTCGGATATCATAGACATTAG 702 0.4687 MLLCSLVFPIAFGDLQVGFYSIMQQIVPERFDQNPSITAALLRMHFHDCFVRKKKLVPTKAFADLILLTKSRKDWKLKCLSTVSCADILTIATRDAVALSGGPKYDVPTGRLDGLVSLEKDFTPPEMVAALMGAHAIGIAKCGFFSERLSDATVDPPLRDQLMRSSPRPAPNTSRVLCGLLRQNKAVVMRIYTRMDSTKNEPSKKDTGPNLSVEVKARSWMPLNKFLFGYHRH 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1538 233 ProSitePatterns Peroxidases active site signature. 38 49 IPR019794 GO:0004601
Glsi11g1538 233 Gene3D - 72 121 - -
Glsi11g1538 233 Gene3D - 21 52 - -
Glsi11g1538 233 Pfam Peroxidase 25 122 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g1538 233 PANTHER PEROXIDASE 25-RELATED 20 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi11g1538 233 Gene3D Peroxidase, domain 2 122 201 - -
Glsi11g1538 233 PRINTS Haem peroxidase superfamily signature 83 100 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g1538 233 PRINTS Haem peroxidase superfamily signature 38 52 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g1538 233 PRINTS Haem peroxidase superfamily signature 101 113 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g1538 233 ProSiteProfiles Plant heme peroxidase family profile. 21 179 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi11g1538 233 SUPERFAMILY Heme-dependent peroxidases 16 168 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1538 Glsi-ChrGlsi11 9631187 9632732 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1538 1 158 Peroxidase AT5G17820 39.130 1.21e-40 141