Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1537 ATGGAAGATCAAGGCCAGCACCCCAATAGTCCAAGGCATGGCAGTGGCGCCGAGAGAAGTGAACCTGTGAGTGTGAGGTCTAGGTGGACTCCAAAGCCTGAGCAAATCCTAATTCTGGAGTCCATCTTCAACAGTGGGATGGTCAATCCCCCCAAGGACGAGACCGTCAGAATCAGAAAGCTTCTGGAGAAATTTGGCCCCGTAGGTGATGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCCAGATCCCGCCGCCGACAGCGCCAGATGCAGGCCACCGTCGATCAAGCAAAGCACCTTCATCATCAGACCAGCTCCGCTCCTGTGGGTTTCGGTGCCTCCTCATCTTTCACCCATTCATCTCCATCTTATCTCGCCGGCTCCTCTTCATCATCATGCGGAGTCGTTGGCGCCCAAGAAGCTATGGATGCTCTCTTTTCAGTCTCTACTCAGATGAGTTTCCCTGAAATTGATCAAACTGCAGCTGCAATATCAGATTTATACCCTTCTGATGCTTCAAATTTCAACTACCATTCTGAAGTTCCAATGGGGCCCATGGACATCAAAACGATGTTTGGTCAAGATCTAATGTTAGTTCATTCCTCTGGAGTGCCAGTTCCAACCAATGAGTTTGGCTTCTTAATGCAAGGCTTGCAGCATGGCGAAAGCTACTTTCTGGTTTCGAAGCCAGCCTAA 699 0.5036 MEDQGQHPNSPRHGSGAERSEPVSVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGPVGDANVFYWFQNRRSRSRRRQRQMQATVDQAKHLHHQTSSAPVGFGASSSFTHSSPSYLAGSSSSSCGVVGAQEAMDALFSVSTQMSFPEIDQTAAAISDLYPSDASNFNYHSEVPMGPMDIKTMFGQDLMLVHSSGVPVPTNEFGFLMQGLQHGESYFLVSKPA 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1537 232 MobiDBLite consensus disorder prediction 85 106 - -
Glsi11g1537 232 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 230 IPR044558 GO:0003700|GO:0048830
Glsi11g1537 232 SMART HOX_1 24 91 IPR001356 GO:0003677
Glsi11g1537 232 Pfam Homeodomain 26 86 IPR001356 GO:0003677
Glsi11g1537 232 FunFam WUSCHEL-related homeobox 11 26 93 - -
Glsi11g1537 232 MobiDBLite consensus disorder prediction 1 28 - -
Glsi11g1537 232 Gene3D - 26 94 - -
Glsi11g1537 232 ProSiteProfiles 'Homeobox' domain profile. 22 87 IPR001356 GO:0003677
Glsi11g1537 232 SUPERFAMILY Homeodomain-like 26 93 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1537 Glsi-ChrGlsi11 9624579 9626260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1537 3 228 Wox Gene Family AT3G03660 52.015 7.85e-63 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Glsi11g1537 Homeodomain 1.7e-12 CL0123