Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1508 ATGACTGGGTCCTTGGCTCGGCAAGGATCCTTGTACAATCTCACCCTTGATGAGGTTCAGAACCAGCTTGGAAATTTAGGGAAACCGCTGGGGAGCTTGAATCTCGACGAGCTGCTCAAGAGTGTGTCTACTGCCGAAGCTGGTCAGGCCCCTGGATTGGATTCTCATTCTAATGGTAATGCTAATGTGCAGCCTGGTGAGCCTGCATCTGGGTTGTTTCTGAATCGACAGGAAAGTCTAACATTATCTGGGGATCTTAGCAAGAAAACTGTTGATGAGGTTTGGAGAGATATCCTACAGAAGAGTAGTGATCAAGATAGGACAGCTCAGGAAAGGCAGCCTACAATGGGTGAGATGACCCTGGAGGACTTCTTGGTGAAGGCTGGAGTAGGGACTGAATCTCTTCCTATTAGGACCGGTGCTATGTCAGGGGTTAATTCACCGTCTACGCATTGGTTGCAATGCCAGCTCCCTCCACTGCAGCCGCCCCCACGCCAGCATCAAAATCAACCGAATATGATTGCTGATTTCATGGCTGGTCATGCGGTCCAACAGTCTTTCTCAGTTTCACTGAACCCAGTTTTGGATGTAGCCTTCCCTGAGTCAATGGTGACATCCTCTTTCGTGGGTACATTATCAGATGCACATATTCCGGGTCGGAAAAGGTTGGCCTCTGGTGATGTGGTTGAGAAAACTGTCGATAGGAGGCAAAAGAGGATGATTAAAAATAGAGAATCTGCAGCTCGATCACGGGCAAGAAAGCAGGCTTACACAAATGAACTGGAGAATAAAGTTAGGAAACTCGAAGACGAGAACGAAAGGCTTAGAAGACAGAATTTGCACCAGATAGTGAGGGCGATGCCACGTGCCCCAGTACCTGAGCCTAGGTGTCATCTTCGAAGAACAAGTTCAGCCCCCTTTTGA 924 0.4848 MTGSLARQGSLYNLTLDEVQNQLGNLGKPLGSLNLDELLKSVSTAEAGQAPGLDSHSNGNANVQPGEPASGLFLNRQESLTLSGDLSKKTVDEVWRDILQKSSDQDRTAQERQPTMGEMTLEDFLVKAGVGTESLPIRTGAMSGVNSPSTHWLQCQLPPLQPPPRQHQNQPNMIADFMAGHAVQQSFSVSLNPVLDVAFPESMVTSSFVGTLSDAHIPGRKRLASGDVVEKTVDRRQKRMIKNRESAARSRARKQAYTNELENKVRKLEDENERLRRQNLHQIVRAMPRAPVPEPRCHLRRTSSAPF 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1508 307 Coils Coil 247 285 - -
Glsi11g1508 307 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 238 253 IPR004827 GO:0003700|GO:0006355
Glsi11g1508 307 Pfam bZIP transcription factor 234 278 IPR004827 GO:0003700|GO:0006355
Glsi11g1508 307 SUPERFAMILY Leucine zipper domain 235 279 IPR046347 GO:0003700|GO:0006355
Glsi11g1508 307 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 5 306 IPR043452 GO:0003700|GO:0045893
Glsi11g1508 307 Gene3D - 234 286 - -
Glsi11g1508 307 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 233 278 IPR004827 GO:0003700|GO:0006355
Glsi11g1508 307 MobiDBLite consensus disorder prediction 48 70 - -
Glsi11g1508 307 SMART brlzneu 231 286 IPR004827 GO:0003700|GO:0006355
Glsi11g1508 307 MobiDBLite consensus disorder prediction 48 65 - -
Glsi11g1508 307 CDD bZIP_plant_BZIP46 235 278 - -
Glsi11g1508 307 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 233 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1508 Glsi-ChrGlsi11 9470833 9473300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1508 4 307 bZIP Transcription Factor Family AT3G56850 51.724 1.40e-85 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi11g1508 bZIP_1 1.4e-13 CL0018