Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1506 ATGAGCGCTCCGAGGTCTTCCCGTGTATCAAGAGTCACTATAACTATGTATCATGCAAAGAAATTTTCGGCGGCGACTGCAGTGCCGCATAAAGCTCAAGGTGGTGCTGAACAACTTGCAAATATTGCTGATTTGAGTGGATCTGCAGTAAAAAATGCCACACCTGCTGGGGGAACTGGGAAACAACGATTACGATGGACATCAGATCTTCATGATCGTTTTGTGGATGCCATTACACAACTTGGTGGACCAGATAGGGCAACACCAAAAGGCGTTCTAAGGGTGATGGGTGTACCTGGACTTACCATTTATCATGTTAAAAGCCATTTACAGAAGTATCGCCTTGCAAAGTACCTGCCAGAATCTTCAGCTGATGGTAAAGAATCTAAAGATGGGAAAAGAAATTCTGGAGATAGTTTATCTGGCACAGATTCTTCCCCGGGACTGCAAATCAATGACGCTCTGAGAATGCAGATGGAGGTTCAGAAACGTCTCCATGAACAGTTAGAGGTTCAGAAACAGTTACAAATGAGAATTGAAGCGCAGGGTAAATACTTGCAGAGGATCATAGAGGAACAGCAGAAACTAGGTAATACTTTGGGAGCCACGGAATCACTGCCATCGTCAAAAGATGAGCAAGATCCTTCCCAGTCAGAACCATCTGGCGATGCCTCTGCAGGGACATTGTCTCCTTTGAAAAAACAGAGAATTGATGACAGTTCCAAGGATCGAATCACTACTTCCCAGGTGTCCACAAAGGCTGCGCAGAAGACTGATTTTGTTGTTGGTCAGTTGGATCCAAACTTGTATGAAAATGATGCTGGGTTTGGATTTCATTTGGAAACTGAATTCAAAAAGAATGAAGATAAAGGGAGGAAGTAG 882 0.4388 MSAPRSSRVSRVTITMYHAKKFSAATAVPHKAQGGAEQLANIADLSGSAVKNATPAGGTGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESSADGKESKDGKRNSGDSLSGTDSSPGLQINDALRMQMEVQKRLHEQLEVQKQLQMRIEAQGKYLQRIIEEQQKLGNTLGATESLPSSKDEQDPSQSEPSGDASAGTLSPLKKQRIDDSSKDRITTSQVSTKAAQKTDFVVGQLDPNLYENDAGFGFHLETEFKKNEDKGRK 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1506 293 Pfam Myb-like DNA-binding domain 64 114 IPR001005 -
Glsi11g1506 293 NCBIfam myb-like DNA-binding domain, SHAQKYF class 61 116 IPR006447 GO:0003677
Glsi11g1506 293 Gene3D - 60 119 - -
Glsi11g1506 293 FunFam Myb family transcription factor 60 118 - -
Glsi11g1506 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 118 IPR017930 -
Glsi11g1506 293 Coils Coil 152 172 - -
Glsi11g1506 293 MobiDBLite consensus disorder prediction 201 255 - -
Glsi11g1506 293 SUPERFAMILY Homeodomain-like 60 115 IPR009057 -
Glsi11g1506 293 MobiDBLite consensus disorder prediction 201 225 - -
Glsi11g1506 293 MobiDBLite consensus disorder prediction 122 137 - -
Glsi11g1506 293 MobiDBLite consensus disorder prediction 122 150 - -
Glsi11g1506 293 Pfam MYB-CC type transfactor, LHEQLE motif 149 195 IPR025756 -
Glsi11g1506 293 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 60 236 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1506 Glsi-ChrGlsi11 9463627 9467920 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1506 55 221 G2-like Transcription Factor Family AT3G04450 52.663 1.91e-52 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Glsi11g1506 Myb_DNA-binding 2.9e-06 CL0123