Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1493 ATGGGACGGACTAGGCTGCTTGTATCGGATTTTATTTTGTCTTTCTCGTGGGTTTGGTCAGGGGTTCTGATTAAGATTTTCGTACACAAATATCTGGGGTTTAGTCATGAGGCCCTCGGTGAGATTGTGAAGGCTGCGGTCTCCATTGCAAACATCTTCTTCTTTGCATTCCTGGGAAATATTACCCATGGGGGCGCCTTCAATCCACTCACCGTTTTGGCTAATGGCATCTCTGGAGATTTAAGCAAATTCCTTTACTGTGTCGGTGCTAGGATTCCCTCTCAGGTGATTGGATCTATTATTGGGGTTAAGCTTATTATTGATACCCTTCCTGAAGTAGGACGGGGACCCCGTTTGAATATTGACATTCATCGAGGTGCATTGACAGAAGGATTCCTTACATTTGCGATTGTTACCATCTCACTGGGGCTGGCCACAAAAATTCCTGGAAGTTTCTTCATGAAGACTTGGATCTCCAGTGTCTCCAAGCTAGCACTGCATATACTTGGCTCTGATCTAACTGGTGGTTGTATGAACCCAGCCTCTGTGATGGGGTGGGCTTATGCTCGAGGAGATCACATAACCAAGGAGCACATCCTTGTGTACTGGCTTGCCCCCATGAAGGCAACTCTGCTGGCAGTGTGGACATTCAAATTGCTAGTTCGGCCTGTAAAAGAAGACAAATCAGGCACTAAAAGTAAATCAGAATGA 711 0.4585 MGRTRLLVSDFILSFSWVWSGVLIKIFVHKYLGFSHEALGEIVKAAVSIANIFFFAFLGNITHGGAFNPLTVLANGISGDLSKFLYCVGARIPSQVIGSIIGVKLIIDTLPEVGRGPRLNIDIHRGALTEGFLTFAIVTISLGLATKIPGSFFMKTWISSVSKLALHILGSDLTGGCMNPASVMGWAYARGDHITKEHILVYWLAPMKATLLAVWTFKLLVRPVKEDKSGTKSKSE 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1493 236 Pfam Major intrinsic protein 5 216 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi11g1493 236 SUPERFAMILY Aquaporin-like 4 227 IPR023271 -
Glsi11g1493 236 PRINTS Major intrinsic protein family signature 87 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi11g1493 236 PRINTS Major intrinsic protein family signature 200 220 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi11g1493 236 PRINTS Major intrinsic protein family signature 160 182 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi11g1493 236 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi11g1493 236 PRINTS Major intrinsic protein family signature 129 147 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi11g1493 236 Gene3D Glycerol uptake facilitator protein. 3 235 IPR023271 -
Glsi11g1493 236 PANTHER AQUAPORIN SIP2-1-RELATED 1 236 IPR044226 GO:0015267
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1493 Glsi-ChrGlsi11 9410553 9412217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1493 1 236 Major Intrinsic Protein MIP AT3G56950 62.869 3.70e-108 310