Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1490 ATGGAACACAGTCAAGACCCTTTTTCTGCAGCTGGGTCCTTTGATAAGTCCAGGGTTTTGAATGTTAAGCCTTTGCGAACTCTTGTTCCTCTATTCCCTTCACCATCTAGCGCCTCTTCATCTTCAGCTTCTCAAGGCGGGGCTCCCTTTATTTCTGTTTCTCCAACTGGTCCTTTCCCCCCTGGGGTTTCTTCCTTCTACCCATTCTTCTTCACTCCAGAGGCCCAGAGGTACTCTGAACAAAACCTACAAACCCCAGCTGTCGTCCCCGCAGTTCCAATTAATTCATTTAGGACACCATCAGCAGGAGCTAGGGCTACTACTAACGGAGACATCGGGTCATCACGAAGAAATAGTAAGGGTTTAACTAGCGAAGATCGCTATAGTAATAGCCAAAATCAAATTAATTTTGAAGCGCATGAAGCAGATGCTGAAGCTGGAACTAGGGGGGAGAGGTTAAGGCTCAGGTCACAGAAGAAGACAAGGGGTCGGCAGGGAGGCAGTTCTGCTTCTGCATCAGCTGATGTTGATGTTGATGCGGTGGGTAATGATATCCTTAAGTCAATTAATCCCTTAGTTTTCAATTTTTTAAATCAACCTGATGGTAGCAAAGAGTCAGTTTCATATACACTTATGATATATGAAGTGCTAAGAAGAAAGATCACACAAATTGAAGATTTGAAAGAAGGGAATCCTGGGGTGGCAAGGCGACCCGATTTAAGGGCAGGTACAATTATGTTGAGTAAAGGGGTTCGAACAAATAGTAAGAAACGTGTTGGAGCCGTGCCTGGTGTTGAAGTTGGGGATATTTTCTTTTTCAGGATGGAATTGTGTCTGGTAGGATTGCATGCACCATCTATGGCTGGAATTGATTACATGGGTATCAAAGTCAGTCAAGAAGAAGAGCCATTGGCTGTAAGTATTGTCTCATCTGGAGGATATGAAGATAATGTGGAGGATGGGGATGTGCTGATTTACAGTGGCCAAGGTGGAGCTAAGGGAGCGAGCGATCAAAAGCTTGAAAGGGGTAATCTTGCATTGGAAAAGAGCCTGCGTCGAGGGAACGAAGTGAGAGTAACTAGAGGTCTAAAGGACAATGCCACTATAGGTGGGAAAATATATGTCTATGATGGCCTTTACAAGATCCAGGATTCATGGGTAGATAAAGCAAAATCAGGTTTCAATGTATTTAAGTATAAATTGGTCAGGTTGCCTGGGCAGCCTCAAGCATATATGACATGGAAATCCATTCAGCAATGGATTGAGAAGTCTACTTCAAGAGTTGGGGTTATATTACCTGATCTTACTTCTGGGGCAGAAAAATTCCCTGTTTGTCTTGTGAATGATGTTGATAATGAGAAGGGCCCTGCATATTTCACCTACTGTCCTACTCTTAAGAATTCAAAGCCAACAAATCCTGTGGAACCTTCTACTGGATGTACTTGTGTTGGTGGATGCCTTCCTGGCAACTTTAACTGTTCTTGCATTCTAAAGAATGGAGCTCATCTCCCATATTCTGCAAACGGGGTACTCTTGGACTTAAAATCTGTGATATATGAGTGTGGTCCTTCCTGTCAATGCCCCCCTACTTGTCGAAATAGGGTTTCTCAAGGTGGCTTGAAAATTCGTTTGGAAGTGTTTAAAAGTAAGGATAAAGGGTGGGGTCTAAGATCCTGGGATCCTATTCGTGCAGGAGCTTTTATATGTGAGTATGCAGGGGAGGTCATCGATAATGCTAAAATGGAGGAGCTTGGTGGTGAAAATGAAGATGATTACATCTTTGATTCCACCCGTATTTATCAGCAGCTGGAAATTTTTCCTAGTGATACTGAAGCTCCAAAGATCCCATATCCCCTCTATGTAACAGCAAGAAACAATGGGAATGTTGCTCGATTTATGAACCACAGCTGCTCTCCAAATGTATTCTGGCGCCCAAGCTTACGTCAAAACAAAAATGAGTCTGATCTCCACATTGCTTTCCATGCAGTCAGGCACATCCCTCCTATGACAGAGTTGACGTATGATTATGGAATAGTTCTTCCTCTCAAAGCAGGCCACAAGAAAAAGAAATGCTTATGCCGATCAGTGAAATGTAGGGATTACTTTTGTTAA 2112 0.4318 MEHSQDPFSAAGSFDKSRVLNVKPLRTLVPLFPSPSSASSSSASQGGAPFISVSPTGPFPPGVSSFYPFFFTPEAQRYSEQNLQTPAVVPAVPINSFRTPSAGARATTNGDIGSSRRNSKGLTSEDRYSNSQNQINFEAHEADAEAGTRGERLRLRSQKKTRGRQGGSSASASADVDVDAVGNDILKSINPLVFNFLNQPDGSKESVSYTLMIYEVLRRKITQIEDLKEGNPGVARRPDLRAGTIMLSKGVRTNSKKRVGAVPGVEVGDIFFFRMELCLVGLHAPSMAGIDYMGIKVSQEEEPLAVSIVSSGGYEDNVEDGDVLIYSGQGGAKGASDQKLERGNLALEKSLRRGNEVRVTRGLKDNATIGGKIYVYDGLYKIQDSWVDKAKSGFNVFKYKLVRLPGQPQAYMTWKSIQQWIEKSTSRVGVILPDLTSGAEKFPVCLVNDVDNEKGPAYFTYCPTLKNSKPTNPVEPSTGCTCVGGCLPGNFNCSCILKNGAHLPYSANGVLLDLKSVIYECGPSCQCPPTCRNRVSQGGLKIRLEVFKSKDKGWGLRSWDPIRAGAFICEYAGEVIDNAKMEELGGENEDDYIFDSTRIYQQLEIFPSDTEAPKIPYPLYVTARNNGNVARFMNHSCSPNVFWRPSLRQNKNESDLHIAFHAVRHIPPMTELTYDYGIVLPLKAGHKKKKCLCRSVKCRDYFC 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1490 703 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 243 422 - -
Glsi11g1490 703 MobiDBLite consensus disorder prediction 100 138 - -
Glsi11g1490 703 SUPERFAMILY PUA domain-like 242 422 IPR015947 -
Glsi11g1490 703 Gene3D - 243 425 IPR036987 -
Glsi11g1490 703 Pfam SAD/SRA domain 259 407 IPR003105 -
Glsi11g1490 703 SMART preset_2 432 526 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Glsi11g1490 703 Pfam SET domain 553 677 IPR001214 GO:0005515
Glsi11g1490 703 ProSiteProfiles SET domain profile. 542 677 IPR001214 GO:0005515
Glsi11g1490 703 SMART set_7 542 683 IPR001214 GO:0005515
Glsi11g1490 703 SMART G9a_1 255 407 IPR003105 -
Glsi11g1490 703 Pfam Pre-SET motif 436 534 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Glsi11g1490 703 Gene3D SET domain 426 702 IPR046341 -
Glsi11g1490 703 SUPERFAMILY SET domain 418 683 IPR046341 -
Glsi11g1490 703 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 20 702 IPR025794 GO:0016571
Glsi11g1490 703 MobiDBLite consensus disorder prediction 95 173 - -
Glsi11g1490 703 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 122 697 - -
Glsi11g1490 703 ProSiteProfiles Pre-SET domain profile. 478 539 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Glsi11g1490 703 ProSiteProfiles YDG domain profile. 260 403 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1490 Glsi-ChrGlsi11 9388800 9390911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1490 14 702 Su(var)3-9 homologs AT1G73100 48.189 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Glsi11g1490 SAD_SRA 6.6e-49 CL0178