Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1486 ATGCTCAGCCGCCCCACCATAGGCACCGCTCTCACTCCCCCCATCACTCGCTACGCCACCCGTCTGATGGCCGTCGAGCATTACCGGATTTTCCTCGGCGACTGTTCGGACCACCGATCGGAGGACGATGATGACCGACTCTTTGAGGACAGCACTTGCGCCAATATGAGGCCCATTTTGGTTCTGGACCTCCTATGGAACCTGGCCTTCGTCCTGGTCGCTGCTGGAGTGCTTCTTTCTACATTTAACGAGCGGCCATCGACCCCGCTGAGGCTTTGGCTCTGTGGGTATGCTTTTCAGTGTATCCTGCATATGGGTTTTGTGTATTTTGAGTATCGGAAGAGAAATAACGATAATAATGGTGCTGAGTTTGGGCTTTCATCGTCTCGGAGTTTGAACAGTATTGTGAAGAAGTTAGATTGTATCAAGGCACTGGCATCGTCTGTTTGGTGGGTCATTGGATTTTATTGGATTGTTGTGGGTGGCCAAGCACTTTTGCTAGAATGCCCTCGTCTCTACTGGTTAACAGTGGTCTTTTTAGCCTTTGGAGTATTGTTTATTATCTTGTGCATTGGGATGACATGTGTAATATTCTTTGCTCTCTTCTGCTTCATTCCTATCATAGCATTAGCTTATGCTATAAAAATCAGAGAAGGTGCATCAGAAAAGGATATCAGATTACTGCCTAGGTATAGGTTTAGTCACTCAAATTTATTGGTGATGGTTGACGATGATATGGAGGAACTTGTTAAAGCAAGAATAGATGCATGCAATGGCAACCACGCCAGTGAACTTTCTCTTCATCCAGATAATTCTGAATGCTGCATCTGCCTTTCTCCGTATGTAGATGGAGCAGAACTGTATCGTCTTCCTTGCACCCACCATTTTCATTGTAGATGCATCAGCCGATGGCTTCGGACAAAAGCAACCTGCCCGCTCTGCAAATTTAATATCCTCAAAGGCGATTCATTGGTTTGA 978 0.4611 MLSRPTIGTALTPPITRYATRLMAVEHYRIFLGDCSDHRSEDDDDRLFEDSTCANMRPILVLDLLWNLAFVLVAAGVLLSTFNERPSTPLRLWLCGYAFQCILHMGFVYFEYRKRNNDNNGAEFGLSSSRSLNSIVKKLDCIKALASSVWWVIGFYWIVVGGQALLLECPRLYWLTVVFLAFGVLFIILCIGMTCVIFFALFCFIPIIALAYAIKIREGASEKDIRLLPRYRFSHSNLLVMVDDDMEELVKARIDACNGNHASELSLHPDNSECCICLSPYVDGAELYRLPCTHHFHCRCISRWLRTKATCPLCKFNILKGDSLV 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1486 325 Pfam Ring finger domain 273 315 IPR001841 -
Glsi11g1486 325 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 248 322 IPR013083 -
Glsi11g1486 325 SMART ring_2 274 314 IPR001841 -
Glsi11g1486 325 PANTHER TARGET OF ERK KINASE MPK-1 46 319 - -
Glsi11g1486 325 SUPERFAMILY RING/U-box 267 320 - -
Glsi11g1486 325 ProSiteProfiles Zinc finger RING-type profile. 274 315 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1486 Glsi-ChrGlsi11 9368594 9373500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1486 57 323 C3H Transcription Factor Family AT1G68070 46.043 3.19e-86 261