Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1474 ATGGCATTATCTCCCCTGATTTCCTCTCTGCAAAATGAACTCAAAATTGAAGAGTCTGAATTCCCCGAAACAGAAATTGGAAACGAAGGTCTCACAAAACGGATCCTCCGAAAAGGAGTCACTTGGAAAACTCCATCTCTTGGTGACCAAGTGGAAGTTCATTTCAGAGGACAAGTTGATAATGGAGCATCCCTCGAATCAAGTTATGATAAAGGAACCCCATTTCGGTTCAACTTAGGCCAGTGTGAAGTTATAAAAGGTTGGGATGAAGGAGTTGCAACCATGAAAAAGGGGGAGAGAGCAATGTTCAAAATACCGCCAAAGTTGGCATATGGCGAGAAAGGTTCTCTGCCATTGGTTCCTCCCAATGCAACTCTCTTTTTTGACATTGAGATGCTGTCTTGGATTACCATCAGGGACTTGAAAGGCGATGGAGGAATCATGAAATGTTGGTTTTGGGATTAA 465 0.428 MALSPLISSLQNELKIEESEFPETEIGNEGLTKRILRKGVTWKTPSLGDQVEVHFRGQVDNGASLESSYDKGTPFRFNLGQCEVIKGWDEGVATMKKGERAMFKIPPKLAYGEKGSLPLVPPNATLFFDIEMLSWITIRDLKGDGGIMKCWFWD 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1474 154 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 44 133 IPR001179 GO:0003755
Glsi11g1474 154 Gene3D - 8 145 IPR046357 GO:0003755
Glsi11g1474 154 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 48 136 IPR001179 GO:0003755
Glsi11g1474 154 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 23 138 - -
Glsi11g1474 154 FunFam Peptidyl-prolyl cis-trans isomerase 23 136 - -
Glsi11g1474 154 SUPERFAMILY FKBP-like 18 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1474 Glsi-ChrGlsi11 9302928 9304025 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1474 23 149 Calmodulin-binding Proteins AT5G48570 55.906 1.12e-47 160