Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1467 ATGGCTGACGTATTCGTCACCGAACCATCGCCGGATCTGAGTCTCGTTGATTTGTCTGCCGAGTTGAACAGACTCCCTATACCAAACATGGATTCTCTCTTTTTCGCCAATAACAGCGAAGACGTATCCCCTGAACTATTCGCTTCTGATTTGGACTTAGGGTTGGATGGCGATTTCGACTTTATCTTCGAAGATCTCGACGATCTCTATATTCCCTCTAATATCGACGAATTCTTTCTACCCGACGCTTCTATTGCCCCTTCCGTGCAAAGTCATGATGATCATGATAGCCGTGCTAATTCCGAGTGTAATCCGAGTTCCGATATCCCTAGATTTTCGAATTTGCAGTCATCTCCGCCTGTTTCTTTAAATAATTCACGTGATCACAATTCACATAACTCAATTGATGTTAAGATTTCGAGCTTCCAATCGCCAGAGTCTGATTCCTGCGACCAGGAATTTTCGGGTGGACCCGTTTCGTCTCAGGGCTCAGGCAACGGTGGGTCAAGCGTTTATGAGGTGATGAATTCAACTTCAGCCGATTCTTCCCGAGACAACAGAGCTTTTTCGTCGCATGTAATTGCTGATGATAACAAAAAATTGGGGGAAATTGGTAAGAGTTGTGTTTTAAAGAGGAAGATAGAACACAATGAAGGAAATACTGTGGCGAGAACTACTAAGCACCGGAGGTCATCAACGCCTATGGAGAATACGACTCAACAGGCTGGTCTCCATACCATTTATAAAGAGGACGAGAAAAGGAAGGCTAGGTTGATGAGGAACCGAGAAAGTGCCCTGCTTTCTAGGCAGAGAAAGAAGCATTATGTGGAGGAGCTTGAGGAGAAGGTGAGATCAATGAATTCCACCATTGCTGATTTGAGTAGTAAGATATCGTTTTTCATGGCCGAGAATGCTACTTTGAGACAGCAACTGAGTGCTGGTGGAATGTGCCCCGCACCACCTCCAGGTATATACACCCATCCTCCTATGCCACCCATGGCTTATTCATCATGGGTGCCGTGTGCTCCCTATGTTGTCAAGCCGCAAGGGTCTCAGGTTCCTTTGATACCGATTCCTAGGTTAAAGTCTCAGCAGCCGGTATCGGTCTCAAAAAGTAAAAAATCCAAACGTAACAAGTCTGAGGGTAAAACTAAGAAGGTTGCCAGCATCAGTTTACTGGGTTTGTTATTCTTTATCCTGCTTGTTGGTGGATTGGCTCCCCTGGTAAATGTCAAGTTTGGAGGTTTAGTGGACGATGTTTCTGGTAGGTCTAGTTATGTTAACGATAGGTTCTATAGTCAGCTCGGAGGTAAAGTTTGGCCCGTAAATGGTCCAAGGAATGGATCTGAAGTAGATAAGGGAGTAGAATTTTCATGTGGAAGATTTGGTATGTCTGACCGACTGACTTATGAGAGAGGCCTGAAACTACCGCTTAGATCAGATTCAGATGAATTTTTTCATCTGGGAAATACTAGTGAGCCTCTTGTTGCTTCTTTGTATGTTCCGAGGAACGATAAGCTGGTGAAAATTGATGGGAACTTGATAATCCATTCTGTCTTGGCCAGTGAGAAAGCTATGGCATCTCAAACTGCTCATGCAAACAATGATAATAGAGAAACCAGTTTGGCGATTTCTAAATATGGGGATTCTGCATTGGCTATTCCTGAAGTTGGAAGAAATAGAGGTCAACATACTCTCTTGTATAGGAGTCCACCTGAACAGAGGAAGGCTCTTGCATCTGGTTCAGCTGAAACTTTGAAGGACCATCTAAAGTCAAGTGCATCTGATGGTAAGATGCAACAGTGGTTCCGTGAAGGACTTGCAGGGCCAATGTTGAGTTCTGGCATGTGCACTGAAGTTTTCCGATTTGATGCCTCACCAACTCCAGGAGCTATAGTTCCAGTATCATCTGTAGCCAGTGTTACTGCAGAAGACCCCCAAAATGCTACTAGTGTCAATAAGAGTAGGAACAGAAGATTCCTCCACAGGCTCCCACTTGCTGGATCTTGTCTTAACGCCACTGAACAACATGCAGCAAGAAATCCACTGAATGACAACTTCCATGGTGATAAATCAATGTCTTCCATGGTGGTTTCTGTGCTTCTTGATCCCAAAGAGGCTGGAAATAGTGATGTTGATGGCATGATAACACCAAAGTCGCTTTCTCGAATTTTTGTGGTTGTGCTTGTGGACAGCATCAAGTATGTTACTTATTCGTGTGGACTTCCTCGCGCATCATCCCATTTAGTGACTACTGAAGGACGACAATCCTTCCTCTAG 2280 0.4439 MADVFVTEPSPDLSLVDLSAELNRLPIPNMDSLFFANNSEDVSPELFASDLDLGLDGDFDFIFEDLDDLYIPSNIDEFFLPDASIAPSVQSHDDHDSRANSECNPSSDIPRFSNLQSSPPVSLNNSRDHNSHNSIDVKISSFQSPESDSCDQEFSGGPVSSQGSGNGGSSVYEVMNSTSADSSRDNRAFSSHVIADDNKKLGEIGKSCVLKRKIEHNEGNTVARTTKHRRSSTPMENTTQQAGLHTIYKEDEKRKARLMRNRESALLSRQRKKHYVEELEEKVRSMNSTIADLSSKISFFMAENATLRQQLSAGGMCPAPPPGIYTHPPMPPMAYSSWVPCAPYVVKPQGSQVPLIPIPRLKSQQPVSVSKSKKSKRNKSEGKTKKVASISLLGLLFFILLVGGLAPLVNVKFGGLVDDVSGRSSYVNDRFYSQLGGKVWPVNGPRNGSEVDKGVEFSCGRFGMSDRLTYERGLKLPLRSDSDEFFHLGNTSEPLVASLYVPRNDKLVKIDGNLIIHSVLASEKAMASQTAHANNDNRETSLAISKYGDSALAIPEVGRNRGQHTLLYRSPPEQRKALASGSAETLKDHLKSSASDGKMQQWFREGLAGPMLSSGMCTEVFRFDASPTPGAIVPVSSVASVTAEDPQNATSVNKSRNRRFLHRLPLAGSCLNATEQHAARNPLNDNFHGDKSMSSMVVSVLLDPKEAGNSDVDGMITPKSLSRIFVVVLVDSIKYVTYSCGLPRASSHLVTTEGRQSFL 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1467 759 Coils Coil 276 296 - -
Glsi11g1467 759 Pfam bZIP transcription factor 252 311 IPR004827 GO:0003700|GO:0006355
Glsi11g1467 759 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 51 749 - -
Glsi11g1467 759 MobiDBLite consensus disorder prediction 222 241 - -
Glsi11g1467 759 CDD bZIP_HY5-like 254 305 - -
Glsi11g1467 759 Gene3D - 251 316 - -
Glsi11g1467 759 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 251 314 IPR004827 GO:0003700|GO:0006355
Glsi11g1467 759 SUPERFAMILY Leucine zipper domain 253 311 IPR046347 GO:0003700|GO:0006355
Glsi11g1467 759 FunFam bZIP transcription factor 49 252 314 - -
Glsi11g1467 759 MobiDBLite consensus disorder prediction 87 185 - -
Glsi11g1467 759 SMART brlzneu 249 313 IPR004827 GO:0003700|GO:0006355
Glsi11g1467 759 MobiDBLite consensus disorder prediction 102 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1467 Glsi-ChrGlsi11 9264804 9268549 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1467 20 752 bZIP Transcription Factor Family AT2G40950 46.917 6.16e-166 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi11g1467 bZIP_1 1.6e-10 CL0018