Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1464 ATGAGGGAGGAGGACTCAAGTTGGTTCCCGAGATGGGGAGAGGAACTTCCTTCCCCTGACGAACTCATGCCCCTCTCCCAAACCCTAATCACTCCTGATCTTGCTATGGCTTTCGATATCCGGAACCCCCATAATAGCCCACATCAAATCCTTCAACCCCCACCTCCTTCAAATCCTTTGCCTTCTCCTGGGAATCCTCACCAACCCAACTCAGCTGAATTTGCTGATTCCGCTGAATTGGGTTCTGGGACTGGAGGTGAGGAACCCGCCCGCACCCTGAAGCGGCCTCGCCTCGTTTGGACTCCCCAACTGCATAAAAGGTTTGTGGATGCCGTAGCACACTTGGGGATAAAAAATGCTGTCCCCAAGACCATAATGCAGCTGATGAGTGTGGATGGGTTGACGAGGGAAAACGTGGCCAGTCATTTGCAGAAATACCGGCTGTATTTGAAGCGCATGCAAGGACTATCGGGAGGCAGCGGTGGTAGCGGTAGTGGTGGAGGGGGAGGTGGATTAGCTGCCTCAGCCGATCCTGCAACTGACCATCTGTTTGCAAGCTCACCCGTGCCACCCCATTTCTTGCCGTTCGTGCCAGTTCCGGCTCTGCAGCACCACCATCACCAGCAGCATATGGCGGCTGTGGCCGCCCATCCCCAGTTGCAGCCGCAGTATCACAGGCAGGTGGGTCATTTTGGGTCGCCGCCGAATGGGAACTTTGAGCATCCGTTTCTGGCAAGGCAGCCTCAACCGCTTCACAGGATTGGGGCACCAGTGCACAATCCGGTACCTGGTTACGTAGAGGACATGGAATCAGTTAACGCAGCAGGTGGGAGAAAGGTTCTTACTTTATTTCCAACAGGAGATGATTGA 870 0.546 MREEDSSWFPRWGEELPSPDELMPLSQTLITPDLAMAFDIRNPHNSPHQILQPPPPSNPLPSPGNPHQPNSAEFADSAELGSGTGGEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGSGGSGSGGGGGGLAASADPATDHLFASSPVPPHFLPFVPVPALQHHHHQQHMAAVAAHPQLQPQYHRQVGHFGSPPNGNFEHPFLARQPQPLHRIGAPVHNPVPGYVEDMESVNAAGGRKVLTLFPTGDD 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1464 289 MobiDBLite consensus disorder prediction 48 66 - -
Glsi11g1464 289 Gene3D - 92 154 - -
Glsi11g1464 289 FunFam Two-component response regulator 91 154 - -
Glsi11g1464 289 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 100 151 IPR017930 -
Glsi11g1464 289 MobiDBLite consensus disorder prediction 1 23 - -
Glsi11g1464 289 MobiDBLite consensus disorder prediction 37 93 - -
Glsi11g1464 289 Pfam Myb-like DNA-binding domain 99 147 IPR001005 -
Glsi11g1464 289 NCBIfam myb-like DNA-binding domain, SHAQKYF class 96 148 IPR006447 GO:0003677
Glsi11g1464 289 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 3 241 IPR044841 GO:0003700|GO:0006355
Glsi11g1464 289 SUPERFAMILY Homeodomain-like 92 152 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1464 Glsi-ChrGlsi11 9246530 9247399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1464 1 289 G2-like Transcription Factor Family AT3G10760 56.286 4.21e-92 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Glsi11g1464 Myb_DNA-binding 2.1e-08 CL0123