Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1463 ATGGCTACAAGACCCATCGTTTCCCAACAAGCCAGAGGCGAGGCAGTCATTGGTGGAGGAAAGCAGCAGAAGAAGAATGGTGCAGCCGAGGGAAGAAATCGCAGAGCCCTGGGTGACATAGGAAACCAGGTGGCCGTTAGAGGAATAGAGGTCAAGCCCAACCGCCCCGTCACGAGAAGCTTCTGTGCCCAACTACTTGCTAATGCGCAAGCCGCAGCTGCTGCTGAAAATAACAAGAAACAGGCTTGTGCTAATGTCGTTGGACCCCCTGTTCTTGATGGAGTTGCAATTGCTAAAAGAGCCGCACCAAAGCCGACTCAGAAAAAACCCACTGTCAAACCGAAGACTGAAAATGTTATTGAAATAAACTCAGAAGAAGAAATTAAGAAAGAGAAGTCTATTAACAAGAAAAAGGAAGGAGATGGTAACTCAAAGAAATCACATAGTCTTACTTCAGTGCTCACAGCTCGAAGCAAGGCAGCATGCTGTATAACTAACAAACCAAAGGAGCAGGTTTTTGACATTGATGCAGCTGACGCTGGTAATGAGCTTGCAGCTGTGGAATATATTGAAGACATTTACAAATTCTATAAGTTGGTGGAGAATGAGAACCGTCCTCACGACTACATGGACTCACAGCCTGAAGTCAACGAACGGATGAGAGCTATATTGGTAGATTGGCTGATAGATGTCCACAGCAAGTTTCATCTTTCGCTTGAAACTCTTTATCTGACTATCAACATAATTGATCGGTTCCTTGCAACCAAGAGTGTGCCAAGGAGGGAACTGCAATTGGTTGGCATCAGTGCCATGTTGATGGCATCCAAGTATGAAGAAATCTGGCCCCCTGAGGTCAATGACTTTGTATGTCTCTCAGACAGGGCTTACACTCATGAACAGATACTTGTAATGGAGAAAACTATACTGGGCAAGCTGGAATGGACTTTGACTGTGCCTACACCTTATGTTTTCCTTGTTCGTTTTGTCAAGGCATCAATTCCAGATGAGAAGATGGAAAACATGGTCCATTTTCTTTCTGAGTTGGCAATGATGAATTATGTCACCATAATGTATTGCCCATCAATGGTTGCTGCCTCAGCAGTCTTAGCGGCTCGGTGCACTTTAAATAAGAGCTCCGCTTGGAACGAGACACTTGAACTACATACGGGCTACTCAGAAGAACAACTGATTGGTTGTGCAAGACTACTGGTAAGCTTCCACTCCATGGCTGGCAATGCAAAGCTTAAGGTTGTGTACAGAAAGTACTCAGATCCCAAGAGAGGAGCTGTGGCATTGCTTCCACCAGCTAAGAATCTCCTGCCTGCAGCTTGTGCTGCTAGAGCTTGTCTAAATATCCCAACTTGCAAACATTACAACGGGCTCGAAAAGCAAAAGGGCTCTAAAAGCCGAAGGACCCCTGATCATAAGCAAAGATTTGACATTAATCTCTCAAAAGCCAGCTTCTTCACAGAGCTTTCTAGGAAGGTGCTTCAGCTGTGCCCCATCCACAACCTCCTTCACTGCACGTGCCATATACGCGCCACTGCTGCATATGATATTGCTCGAGGCCTGCAATTTTCATATGTTACTGCAATGCATCAGAACAAAGATCCACCTCGAACCTTTCTCCGCCCTCCTCCTTCCAATCCCTCTTCCACCAACAACTCCGCCACAACTATCGCCACCCTCCTGCACTCCTCTCTCCCTTCCTCGCTTCCCCGACTTTCTCTCTCTCTTTCCGTGGATCAAATTCTAGTGACAGATTTAATTCAAGAATCATATCCCTGA 1788 0.4597 MATRPIVSQQARGEAVIGGGKQQKKNGAAEGRNRRALGDIGNQVAVRGIEVKPNRPVTRSFCAQLLANAQAAAAAENNKKQACANVVGPPVLDGVAIAKRAAPKPTQKKPTVKPKTENVIEINSEEEIKKEKSINKKKEGDGNSKKSHSLTSVLTARSKAACCITNKPKEQVFDIDAADAGNELAAVEYIEDIYKFYKLVENENRPHDYMDSQPEVNERMRAILVDWLIDVHSKFHLSLETLYLTINIIDRFLATKSVPRRELQLVGISAMLMASKYEEIWPPEVNDFVCLSDRAYTHEQILVMEKTILGKLEWTLTVPTPYVFLVRFVKASIPDEKMENMVHFLSELAMMNYVTIMYCPSMVAASAVLAARCTLNKSSAWNETLELHTGYSEEQLIGCARLLVSFHSMAGNAKLKVVYRKYSDPKRGAVALLPPAKNLLPAACAARACLNIPTCKHYNGLEKQKGSKSRRTPDHKQRFDINLSKASFFTELSRKVLQLCPIHNLLHCTCHIRATAAYDIARGLQFSYVTAMHQNKDPPRTFLRPPPSNPSSTNNSATTIATLLHSSLPSSLPRLSLSLSVDQILVTDLIQESYP 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1463 595 PANTHER CYCLINS 139 428 IPR039361 -
Glsi11g1463 595 ProSitePatterns Cyclins signature. 221 252 IPR006671 -
Glsi11g1463 595 Pfam Cyclin, N-terminal domain 192 316 IPR006671 -
Glsi11g1463 595 SUPERFAMILY Cyclin-like 182 316 IPR036915 -
Glsi11g1463 595 SMART cyclin_7 323 405 IPR013763 -
Glsi11g1463 595 SMART cyclin_7 226 310 IPR013763 -
Glsi11g1463 595 Pfam Cyclin, C-terminal domain 319 435 IPR004367 -
Glsi11g1463 595 SUPERFAMILY Cyclin-like 318 437 IPR036915 -
Glsi11g1463 595 SMART Cyclin_C_2 319 436 IPR004367 -
Glsi11g1463 595 Gene3D - 206 317 - -
Glsi11g1463 595 CDD CYCLIN_AtCycB-like_rpt2 319 435 - -
Glsi11g1463 595 Gene3D - 192 432 - -
Glsi11g1463 595 CDD CYCLIN_AtCycB-like_rpt1 169 314 - -
Glsi11g1463 595 MobiDBLite consensus disorder prediction 99 118 - -
Glsi11g1463 595 MobiDBLite consensus disorder prediction 131 150 - -
Glsi11g1463 595 MobiDBLite consensus disorder prediction 131 145 - -
Glsi11g1463 595 MobiDBLite consensus disorder prediction 537 556 - -
Glsi11g1463 595 MobiDBLite consensus disorder prediction 1 35 - -
Glsi11g1463 595 FunFam G2/mitotic-specific cyclin-1 307 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1463 Glsi-ChrGlsi11 9238259 9246387 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1463 1 446 Core Cell Cycle Gene Families AT4G37490 52.723 2.77e-145 425