Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1457 ATGGCATCCAGCTCATTGTCATCCTCTGGCTCTTGGACTGCTAAGGACAATAAAGCCTTTGAAAGGGCTCTAGCTGTCTATGACAAGGACACCCCTGATCGTTGGTACAATATTGCCAGGGCTGTTGGTGGCAAAACTGTAGAGGAAGTGAAGAGGCACTATGAGCTTCTCGTGCAGGACATTAAGCATATTGAGTCAGGACAAGTGCCCTTCCCAAATTACAGGAAAAGTGGAGGGTCTGACGAGGAAAAAAGGTACTATAATCTAAGGCCTCCATCAAACTAA 285 0.4632 MASSSLSSSGSWTAKDNKAFERALAVYDKDTPDRWYNIARAVGGKTVEEVKRHYELLVQDIKHIESGQVPFPNYRKSGGSDEEKRYYNLRPPSN 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1457 94 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 83 IPR044636 GO:0003700
Glsi11g1457 94 CDD SANT 12 58 IPR001005 -
Glsi11g1457 94 SMART sant 8 60 IPR001005 -
Glsi11g1457 94 Pfam Myb-like DNA-binding domain 10 54 IPR001005 -
Glsi11g1457 94 Gene3D - 2 71 - -
Glsi11g1457 94 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Glsi11g1457 94 MobiDBLite consensus disorder prediction 68 94 - -
Glsi11g1457 94 SUPERFAMILY Homeodomain-like 11 65 IPR009057 -
Glsi11g1457 94 FunFam Transcription factor SRM1 4 71 - -
Glsi11g1457 94 ProSiteProfiles Myb-like domain profile. 10 58 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1457 Glsi-ChrGlsi11 9186669 9186953 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi11g1457 Myb_DNA-binding 1.1e-05 CL0123