Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1447 ATGGCGAGGCGCTTGGTTCCGTTGCTTAATCGGGTTTTGGTGGAGAAAATTGTCCCTCCATCCAAAACTAACGCCGGAATTTTGTTACCCGAGAAATCGACTAAGCTGAACTCTGGAAAAGTTATTGCTGTCGGCCCTGGCATTCATAATAAGGAGGGGAAGCCAATCCCTGTAGCTGTAAAGGAGGGTGACACAGTCCTTTTACCAGAATATGGAGGAACCGAGGTGAAGCTTGGTGACAAAGAGTATCATCTATATCGAGATGACGATATACTGGGGACATTGCATGATTGA 294 0.4626 MARRLVPLLNRVLVEKIVPPSKTNAGILLPEKSTKLNSGKVIAVGPGIHNKEGKPIPVAVKEGDTVLLPEYGGTEVKLGDKEYHLYRDDDILGTLHD 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1447 97 Hamap Co-chaperonin GroES [groES]. 4 96 IPR020818 GO:0005524|GO:0006457|GO:0044183
Glsi11g1447 97 PRINTS 10kDa chaperonin signature 26 47 IPR020818 GO:0005524|GO:0006457|GO:0044183
Glsi11g1447 97 PRINTS 10kDa chaperonin signature 82 95 IPR020818 GO:0005524|GO:0006457|GO:0044183
Glsi11g1447 97 PRINTS 10kDa chaperonin signature 5 20 IPR020818 GO:0005524|GO:0006457|GO:0044183
Glsi11g1447 97 PRINTS 10kDa chaperonin signature 61 73 IPR020818 GO:0005524|GO:0006457|GO:0044183
Glsi11g1447 97 FunFam 10 kDa chaperonin, mitochondrial 1 97 - -
Glsi11g1447 97 SUPERFAMILY GroES-like 3 96 IPR011032 -
Glsi11g1447 97 PANTHER 10 KDA HEAT SHOCK PROTEIN 2 94 IPR020818 GO:0005524|GO:0006457|GO:0044183
Glsi11g1447 97 SMART Cpn10_2 4 95 IPR020818 GO:0005524|GO:0006457|GO:0044183
Glsi11g1447 97 Pfam Chaperonin 10 Kd subunit 5 94 IPR020818 GO:0005524|GO:0006457|GO:0044183
Glsi11g1447 97 CDD cpn10 4 95 IPR020818 GO:0005524|GO:0006457|GO:0044183
Glsi11g1447 97 Gene3D GroES chaperonin 1 97 IPR037124 GO:0006457
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1447 Glsi-ChrGlsi11 9105165 9106441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1447 3 96 Calmodulin-binding Proteins AT5G20720 38.542 5.95e-11 55.1