Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1435 ATGAGCACCTCCTATCACCCCCAATCCGAAGTGGTGAACCGCTGCTTGGAAGCTTACTTACGCTGTTTTGCACATGAACAGCCCCGTACATGGAGTAAATATTTATGTTGGGCAGAATATTCTTTTAATACTGGCATCCACTCGTCAACAGGTACCACTCCATTTAAGGTTTTATACGGGAGGGATCCACCAGCTCTTCACCCATTCGTCAAAGGTGAAACTCAGCTTGCAGATTTGGAAACCCAACTCTTGCAGCGAGATGACATGTTGAAACTATTGAAAGACAACCTTACCAAAGCCCAATCCCGTATGAAGGCGCAAGCTGATGCTCAACGCAGGGAACTATCTTTTAATGTAGGAGATGCTGTCTTTCTTCGCATTCAGCCATATCGCCAGCGTTCTTTAGCCAAACGTAGATATGAGAAGCTTTCTCCACGATTTTTTGGACCTTATAAGGTTATCCGACGTGTGGGTCCCGTGGCATATGAACTCGAATTGCCAGCTTCTGCTAAGGTACATCATGTTTTTCATGTTTCGCTACTCCGCGCCGCCCATGGTCAGTCTCCTTCGGTTCCTCCCGTTGCTCTACCAATTACTGCTGAGTGGGAACTCCTTTTATCTCCTGCTAAAGTTTTGTCTCACCGTTGGGTTACTCATTCGGGAGTCTCAGTTCTAGAACTTCTAATTCAATGGCAAAACAGACCTTTAGAAGAAGCCAGTTGGGAAGAATATGATTTACTGGTTGAACAATTTTCCAGCTTCCGCCTTGCGGACAAGGCGTCTTTTGAAGGGGGGGATACTGATAAGAGACCTCTACGCACATATACTAGAAGATATACACGTGGGAAGAGGGATTACACATCAACACTTGACCAGTCATATTGTGTGGAATTCATTATCTTGGAAGGAGATAACCTTACTAGGTTGTTTCCTGGAACATCCTTGGATTGGGGCAGCATCCAGTCGAACTCCATGCACTTGTTTGGAGTTTTGACTGCACTTGTTGTTCTCCCTATTGTTTGGTTGAGGGCTGGAGGGGGTGTTGCGACAGTTTTAATTGTTATCAGTGTGTTTATTGTTGGGACAAGAGATGGTGTTGGATTCCATCACACTGGTCAATTAGTGAATTGGAGCTTCATTCCATTTGCTATTGGCGTTGCAGTCATCGGATATCTCATGTTTGGTGAAGACACTTTGTCTCATATAACTTTGAATACGCCACCTCACGCCTTTGTTTCCGAAGCGGCATTGTGGACAACGAAGAGAGTTATTTTAATGTTCCTTTTCCTTAACTACGAACAAATATGCTTTGTTGATGAACCCACTGGCAAAGAATCTGGAGGAGTTGCTGCCTGCTGA 1359 0.4474 MSTSYHPQSEVVNRCLEAYLRCFAHEQPRTWSKYLCWAEYSFNTGIHSSTGTTPFKVLYGRDPPALHPFVKGETQLADLETQLLQRDDMLKLLKDNLTKAQSRMKAQADAQRRELSFNVGDAVFLRIQPYRQRSLAKRRYEKLSPRFFGPYKVIRRVGPVAYELELPASAKVHHVFHVSLLRAAHGQSPSVPPVALPITAEWELLLSPAKVLSHRWVTHSGVSVLELLIQWQNRPLEEASWEEYDLLVEQFSSFRLADKASFEGGDTDKRPLRTYTRRYTRGKRDYTSTLDQSYCVEFIILEGDNLTRLFPGTSLDWGSIQSNSMHLFGVLTALVVLPIVWLRAGGGVATVLIVISVFIVGTRDGVGFHHTGQLVNWSFIPFAIGVAVIGYLMFGEDTLSHITLNTPPHAFVSEAALWTTKRVILMFLFLNYEQICFVDEPTGKESGGVAAC 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1435 452 SUPERFAMILY Ribonuclease H-like 1 56 IPR012337 -
Glsi11g1435 452 PANTHER CHROMO DOMAIN-CONTAINING PROTEIN 85 240 - -
Glsi11g1435 452 Coils Coil 90 114 - -
Glsi11g1435 452 Gene3D - 1 104 IPR036397 GO:0003676
Glsi11g1435 452 SUPERFAMILY Chromo domain-like 171 250 IPR016197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1435 Glsi-ChrGlsi11 9048141 9052973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1435 293 420 Amino Acid or Auxin Permease AAAP Family AT2G41190 49.721 9.98e-44 158