Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1427 ATGGGAATGGCAACGGAGTCCCAATTTCATGTGTTAGCCGTCGATGACAGCCGAGTGGACAGGAAGATGATTGAGCGGCTGCTCAGAACCTCTTCGTACCAAGTTACTACGGTTGATTCTGGTAGCAAGGCTTTAGAGTTTCTGGGCTTACGCGAGGATCAACCCAAAACCCAAAATACACCCTCTGTTTCTCCTAACTATCATCAGGAAGTGGAAGTGAATCTTGTTATCACAGACTATTGCATGCCTGGCATGACAGGCTATGATTTACTCAAGAAAATCAAGGAATCTTCGTCTTTGAGAAACATACCAGTGGTGATTATGTCATCCGAGGATGAGCCTTCAAGGATTAGCAGATGCTTGGAGGAAGGAGCAGAGGAGTTTCTCTTGAAGCCAGTGAGCCAGTCAGATTTGAATAGGCTTCGACCGCATTTGATGAAGAACAAGTTGAAGAATCAAAAGCAAGAAACACAAGACAAACTTGAAAACACGGGAGTTCAACAACCGCAGCAACAAAATGATCAGCAACAAGCAAAACTCCCCCAATCACAGCCTCAGCCTCAGCTACAGCCACTCCTAGAACAACAAGCACTACAAGCAGCCAGTAACAAGAGAAAGGCCATGGAACAAGCGATTTCCCCGGAGACAGACAGAACAAGACCAAGATACAGTGGCATAGCCACAGTGGTATGA 693 0.4603 MGMATESQFHVLAVDDSRVDRKMIERLLRTSSYQVTTVDSGSKALEFLGLREDQPKTQNTPSVSPNYHQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSEDEPSRISRCLEEGAEEFLLKPVSQSDLNRLRPHLMKNKLKNQKQETQDKLENTGVQQPQQQNDQQQAKLPQSQPQPQLQPLLEQQALQAASNKRKAMEQAISPETDRTRPRYSGIATVV 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1427 230 MobiDBLite consensus disorder prediction 159 203 - -
Glsi11g1427 230 CDD REC_typeA_ARR 11 141 - -
Glsi11g1427 230 Coils Coil 147 167 - -
Glsi11g1427 230 Gene3D - 10 224 - -
Glsi11g1427 230 MobiDBLite consensus disorder prediction 150 230 - -
Glsi11g1427 230 SMART REC_2 9 142 IPR001789 GO:0000160
Glsi11g1427 230 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Glsi11g1427 230 SUPERFAMILY CheY-like 8 173 IPR011006 -
Glsi11g1427 230 Pfam Response regulator receiver domain 11 138 IPR001789 GO:0000160
Glsi11g1427 230 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 188 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1427 Glsi-ChrGlsi11 8950127 8951623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1427 1 230 Response Regulator Gene Family AT3G57040 62.447 2.99e-94 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Glsi11g1427 Response_reg 1.2e-21 CL0304