Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1417 ATGTCCCTGGAAGAGTCTCTAAAATCGTTATCACTGGACTATCTGAACCTGCTCATCAATGGCCAAGCTTTCAGCGACGTTACCTTCAGCGTGGAGGGTCGCCTAGTCCACGCTCACCGCTGCATCCTCGCTGCCCGAAGCCTGTTCTTCAGGAAATTCTTCTGCGGCCCAGACCCACCGTCCGGCCTGGATCCCCCCTCAAGGCCTGGGGTCATTCCCGTTAACTCTGTGGGCTATGAGGAGACTGAACGGGGGAATATCTCTCACTTCTCTTTCTGTTCCTCTATGGAATTCAACAATCCTGTCCACTTATGGCTTCAATTCCCATCACCAAAAACAGTTTTTAGTTCTTCTCCTAGCTTCTTTTCACCTTTCTGGGTATCAGTTTCTTTTGGCTTCATTCTGGGTAAATTAAAGCTCTTTCTGTTTATGTGA 435 0.4874 MSLEESLKSLSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSGLDPPSRPGVIPVNSVGYEETERGNISHFSFCSSMEFNNPVHLWLQFPSPKTVFSSSPSFFSPFWVSVSFGFILGKLKLFLFM 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1417 144 Gene3D Potassium Channel Kv1.1; Chain A 5 103 IPR011333 -
Glsi11g1417 144 PANTHER BTB/POZ DOMAIN AND ANKYRIN REPEAT-CONTAINING PROTEIN NH5.2 1 80 IPR044284 GO:0099402
Glsi11g1417 144 ProSiteProfiles BTB domain profile. 25 54 IPR000210 GO:0005515
Glsi11g1417 144 Pfam BTB/POZ domain 16 57 IPR000210 GO:0005515
Glsi11g1417 144 SUPERFAMILY POZ domain 9 61 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1417 Glsi-ChrGlsi11 8890826 8891752 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Glsi11g1417 BTB 2.1e-09 CL0033