Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1413 ATGTTCAGAACAGCCTACTCCAATTCAAATGTCAGATGCGTCGCCCAGTTATATGAAGGCAACCAGCAGCTCTCATGCAAAGAAGAGCTTCCAGGCAAGTTTTCTGATTTTCATATTCGATCTCTTTGCACAAGTGATTTGGTAGTGCCCCTTCTTGAAAAATCAGATATTGCTTCTTCTGGGCAGAGTTCACAAAGAATGTTCGCAAGGAAGAGTTTAACAAGAATGTCAACTTTGAAACTGAAGAGGACTTTGACCAGAAAGCTATCCGGAGGAACTGAGCTGAAGAGGAAACTGAAGTCGTTAAGATCAATCAAGAGATCAACAAGGCAAGGAAAAAGCCAATACAAGGCAAGTCCCATACATTGTGAAACTATTCTTTGCAACGATGGTCAGAATAGTAAAAGTACTAGTGAGAATTCCCAGAGAGTTATTACAAGAAGATTAAGTTTGAAACCTGTGCGACTCTTAAGCAAAATGTCGACTTTCAAATCGACGAAGACTTGTATAGAGAAAAGCCCTCAGATATTACAATCCCCAGACTCAAGGTTGCATAAAGCCACCTGTTCTTCAGCTCTCAAGGATTCCCATTTCCCCGATCAAATTGAAGTCCCGCTAGAAGGAAGTGGATCTCAAGGAGCATTAGCAAGGAAGGTTTGTCCATATACTTACTGCTCTCTTCATGGTCGTCACCATGACAATTTGCCTCCCCTGAAGCGTTTCATGTCAATGAGGAGGCGTGTTTTGAAGACCCAAAAGAGCATTAAAATGGAGAGTCGACCTGTTACAAGATCGAAGCATTCTGGTAATACTAGAAAAGGCACTCAGACAAGTCGAAGTGTCCAGAGTGAAGATCCTGCAAGTAAAACAGCCCATTTTCGGAATGTAAAAAAGCTGGCTAGGGTCTCGCCTGTTAGGACCCGCGAAACACCAGTATCCACATACACTGGAACAGAAAATGAAGAAAACATGAATTTCAGATATAATGCCGAGGTTTTGCTTGGTGAAACATCATTTCCACATATAAGTTTTGACGAGTATCTCAATGATTCTCTTGCAGAAAATGGGTACAGCTTATCCTCTTTTTTGGCAATCAAGGAAACAAATATGGAATGCTGCTGTACTGCCACTGAAAGGGACAAACCAGATTCCAAAGTGATTGACGACAATCAAGTAGCTGCGAGCAACAAAAATGATGAAAGCACTAAATCTGTTCTTATTGATGATGATCAACCTGAAATCATAGACTCAAAATTGCTGCTGCTTGAAGATCCTGGCCTTCGTGGTAAGCATTCCCTTTTAACAGATGATGGCCCAGTCGCTAGCAATGAGGTGCTTGGGGCAGAAGGTTCCCAAGAGAAACAGGAAGAAAGAAACTCAATCCTGAAGCTGACCAATCCCGAATCATCTGGAGAAAATTTAAATGCCTGTGAATTCACCGGTGCAAGAAATCAATTATCCGTTAAATCAAAAGGATCAGATCAATATGACGCTGTGGAATTGACATCAACTACTGCAGACATGTTTTCTGCTTCTGAAATCGAGACATTGAAGGAAGAAATAACAACCAAAGACAAAAATATGGAGCCAGATTATGATTCTCAGAAGAGAGAGTCTAAGCCCGCTTCTACCACTGATGTGTCCTACAGAATGCAGGAAGGAGATAAAAAATATATAAGGATGTGGCACTTGATGTATAAACATGCAGTGATGAGTAATGCAGGGAATGCTGAAGATAAGCTTCCTTTTGATGGGGCGAACAATGAAGGACAAGGGAAAGATGATCTCTCAATTAATGGAGTAAACAGCTCTTCTTGTGAGGATTCTTGTGGAACAGATCAGGATATTGATGATGAAAATGAGAATGTAGTTGAGCTGGTGCGGAAAGCGGTTGATGAAATTCTTCTCCCAGAAACGGAAGACCTCTCTTCTGATGATCACTCAAAATCTAGAGGCAAGGCTTCATATGAGAAACTCCCAGAAAATAGTCAAGGTAAGGAAGGGGATAGAAGCGCCTCAACATCAACATGGCTAAAAGTTGACAAATCCCGAAGTCATGAGGAAGAGAAAACAGCACAGAGGATAGGAAATAAACCTGACCCAAGAACACCAAAAAGCTGGAGCAATCTGAAAAAAATATTACTCCTGAGAAGGTTTGTAAAGGCATTAGAAAAGGTAAGAAACTTCAACCTACGAAAACACAGACATTTGCCTTCTTCAGATGCCAACCTAGAAGCAGAAAAGGTTTATCTCAGGCACCAGACGGCAGAAGAGAGAAAAAATGTTGAGGAATGGATGCTTGATTTTGCACTTCAAAAGGTTATTTCCAAATTAGCTCCTGCTCAAAAACGAAGGGTTGCACTTCTAGTAGAAGCTTTTGAAACAATTCTGCCATTTCAAGACACTGAAAATGGCCCACCATCCTCTGCAACAGTTGAAACTCAAGTAAATACAATTCAAGCCCTTAATGACTCCTCAGATCATAGTGAGGAAGTCAAAGGCAAAGAAAGCGATTATGATTATTCGGCCAAACTATTGCTTGGCAAAGCATTATCCTCTCACAATAGTACTGAGGAATATGCTCATCATGCCAGTTATAACCCAATGCAAGAACAGCAAAATTCTACTGTGATTAAAGAGGGAAGATGTGATTATTCTTGGACTGAGACAGTCAAGAACAACACGGCTTCCAGAGCCGCTGATGGAGACTGGAATGAAAAGCAAAGTTTAGCCAGCAGTTATGACAAAGGGGAGAAGAACAACTCAATTGTTGATGATAATGTTTGTCTTGCAGAACTCAAAGATTCCACATCATTGGCCTTTAGTACGCCGGTTGACATTATCAGCACTTCCCATGGGGAGGCTCCGACCAATGAAATAGTCAATGAAGCTCTACAAGACTTGATATTTGATTCGACTACAGAAATTCCAAATTGCAAATCCGAGTCACGTGGCAGAAATTTTGAAACCAAGAATCTGATCAGTGCAAGTGAGGAACCACTTTCAAAGTCCAAAAGCTTAATCCTAAAAAGTTTTGTGACATCACTGGGATCTAATTTGGTCTCTTCAGCAGCTCCTTCAGACCCGCTAGATGAACCAGTAGCAGAAATTGAGAACCTTGAACAGTTCTCTATACCTGAAGAAACTGAGATAAAGCAAGAGAAACAGAACCACACAAGGCTGTGGTACTTGGTATACAAGCACATGGCATCAGGTATAGAGGCAAATGATTTCAAGCCACTTGTGGATGAGGATTCTGAGAAAGAGTCGGGGTATGATGGTGGTAGAATCAGAGAAACAAATACTTCCATGTCTTATAAAAGTACTCCTGAGGTAAATGAAGATATGCCCTTACAACATCACCGTGTAGCTGACCCAGAGGCTGAACTTCACCAGATTGAAGCCATCAAAATGGTAGAAGAAGCAATTGATGCAATCCTTCCAGATGATCAGGAACATTCACCTGATGGTCAGTCACTCACTGACAGCACGAGTTCAGACAACTCCAGACAGTCCCACAGAGCCGAGGGAGCGTACAGTGAAGACCTGAACCGAAAAGAAGAAAGGGTGAGGTCTGGTAATGGAATTACCCAAGAAAAAAATGAAGAAGAACCAGCATTGAAGGAGGGAAACAAACCAAACCAGCAATTTTCTAGGAGCTGGAGTAATCTTAAAAAAGTGATCATGCTCAGAAGATTCATCAAGGCATTGGAAAAAGTAAGGAAATTCAATCCACGAGGGCCCAGATATCTGCCAGTGGAGCCTGATCCAGAAGCAGAAAAAGTCAACTTAAGGCACCAAGACATGGGAGAAAGAAAGGGTTCAGAAGAATGGATGCTCGATCATGCACTTAGACAGGTTGTGGCCAAATTAAACCCAGCTAGGAAAAGAAAAGTGGAGCTGCTAGTGGAAGCTTTTGAAACAGTCATGCCAACCATCAAAAACTGA 3948 0.4162 MFRTAYSNSNVRCVAQLYEGNQQLSCKEELPGKFSDFHIRSLCTSDLVVPLLEKSDIASSGQSSQRMFARKSLTRMSTLKLKRTLTRKLSGGTELKRKLKSLRSIKRSTRQGKSQYKASPIHCETILCNDGQNSKSTSENSQRVITRRLSLKPVRLLSKMSTFKSTKTCIEKSPQILQSPDSRLHKATCSSALKDSHFPDQIEVPLEGSGSQGALARKVCPYTYCSLHGRHHDNLPPLKRFMSMRRRVLKTQKSIKMESRPVTRSKHSGNTRKGTQTSRSVQSEDPASKTAHFRNVKKLARVSPVRTRETPVSTYTGTENEENMNFRYNAEVLLGETSFPHISFDEYLNDSLAENGYSLSSFLAIKETNMECCCTATERDKPDSKVIDDNQVAASNKNDESTKSVLIDDDQPEIIDSKLLLLEDPGLRGKHSLLTDDGPVASNEVLGAEGSQEKQEERNSILKLTNPESSGENLNACEFTGARNQLSVKSKGSDQYDAVELTSTTADMFSASEIETLKEEITTKDKNMEPDYDSQKRESKPASTTDVSYRMQEGDKKYIRMWHLMYKHAVMSNAGNAEDKLPFDGANNEGQGKDDLSINGVNSSSCEDSCGTDQDIDDENENVVELVRKAVDEILLPETEDLSSDDHSKSRGKASYEKLPENSQGKEGDRSASTSTWLKVDKSRSHEEEKTAQRIGNKPDPRTPKSWSNLKKILLLRRFVKALEKVRNFNLRKHRHLPSSDANLEAEKVYLRHQTAEERKNVEEWMLDFALQKVISKLAPAQKRRVALLVEAFETILPFQDTENGPPSSATVETQVNTIQALNDSSDHSEEVKGKESDYDYSAKLLLGKALSSHNSTEEYAHHASYNPMQEQQNSTVIKEGRCDYSWTETVKNNTASRAADGDWNEKQSLASSYDKGEKNNSIVDDNVCLAELKDSTSLAFSTPVDIISTSHGEAPTNEIVNEALQDLIFDSTTEIPNCKSESRGRNFETKNLISASEEPLSKSKSLILKSFVTSLGSNLVSSAAPSDPLDEPVAEIENLEQFSIPEETEIKQEKQNHTRLWYLVYKHMASGIEANDFKPLVDEDSEKESGYDGGRIRETNTSMSYKSTPEVNEDMPLQHHRVADPEAELHQIEAIKMVEEAIDAILPDDQEHSPDGQSLTDSTSSDNSRQSHRAEGAYSEDLNRKEERVRSGNGITQEKNEEEPALKEGNKPNQQFSRSWSNLKKVIMLRRFIKALEKVRKFNPRGPRYLPVEPDPEAEKVNLRHQDMGERKGSEEWMLDHALRQVVAKLNPARKRKVELLVEAFETVMPTIKN 1315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1413 1315 Pfam Plant calmodulin-binding domain 1208 1311 IPR012417 GO:0005516
Glsi11g1413 1315 Pfam Plant calmodulin-binding domain 696 798 IPR012417 GO:0005516
Glsi11g1413 1315 MobiDBLite consensus disorder prediction 1149 1218 - -
Glsi11g1413 1315 SMART CaM_binding_2 1197 1311 IPR012417 GO:0005516
Glsi11g1413 1315 SMART CaM_binding_2 682 798 IPR012417 GO:0005516
Glsi11g1413 1315 MobiDBLite consensus disorder prediction 379 400 - -
Glsi11g1413 1315 MobiDBLite consensus disorder prediction 433 458 - -
Glsi11g1413 1315 MobiDBLite consensus disorder prediction 581 618 - -
Glsi11g1413 1315 MobiDBLite consensus disorder prediction 637 704 - -
Glsi11g1413 1315 MobiDBLite consensus disorder prediction 1174 1209 - -
Glsi11g1413 1315 MobiDBLite consensus disorder prediction 520 549 - -
Glsi11g1413 1315 MobiDBLite consensus disorder prediction 268 289 - -
Glsi11g1413 1315 MobiDBLite consensus disorder prediction 520 540 - -
Glsi11g1413 1315 MobiDBLite consensus disorder prediction 1157 1173 - -
Glsi11g1413 1315 MobiDBLite consensus disorder prediction 253 292 - -
Glsi11g1413 1315 MobiDBLite consensus disorder prediction 1081 1095 - -
Glsi11g1413 1315 MobiDBLite consensus disorder prediction 1081 1102 - -
Glsi11g1413 1315 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 25 798 IPR044681 GO:0005516
Glsi11g1413 1315 MobiDBLite consensus disorder prediction 637 665 - -
Glsi11g1413 1315 MobiDBLite consensus disorder prediction 592 610 - -
Glsi11g1413 1315 MobiDBLite consensus disorder prediction 680 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1413 Glsi-ChrGlsi11 8848995 8852942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1413 560 845 Calmodulin-binding Proteins AT5G04020 32.997 2.74e-26 115