Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1388 ATGGAATTGTGCAGATGGTGGATAGCTATCCCAATTACCTTACGAGTTATTGGGAATTTGTTGAGTTCTCTACTAGACAGGCATAATTTCAACCATATTATCCAGAGAAGAAAGCGTGTGGTTGGAGATGAAGGAAGAGGCAGTCCCTCTGTGGCTGCCGGCGATACTCCCTTTTGCTTCAGGTCATCGACACAAGCTCTCCCAAGAAGTGACTTTGGGAAGGATGAGATTTTGACGGAGAGAGCTCGTGAGACATTCGTGCAAAAACTTATGTCGAACGTCTTTCGTCTTCTTGAGTTCGTCTTACTAAGTTGCACCATTTCCATATTCTCAATGGAACTTAAAAAGGACATATTCGTACACTTGGTTGGGTACTTGAAACCGTACCCGGTAGCGCTCTCCTCCTCTCTTGTTGGTTCAAGGATTATGGAGACGTCTAAAAGTCAGTGGACGCTTCAACCCGTTTTGTTGTTCTCTCTGCTGTTCACAGTAGTAGGATCATCACATCACCGCCGGGTGCCGTCAAGCATCAGATTACTACCACCTTCTACGCCGGAGAGGCACCTCCACATAGCAGCACCTGGTGCACCCTTCAAGATAGCTCTCTTTGCCGACTTGCATTTTGGAGAGGCCTCGTCCACCGATTGGGGTCCACTTCAAGATGTAAACTCCATTAAGGTCATGAATCGAGTACTGGATGATGAAACTCCAGATTTTGTAATATATCTCGGTGATGTCATTACGGCAAACAATATTATGATTAAAAATGCAACCTTGTATTGGGATGAGGCAATCTCTCCAGCAAGAAACAGGGGCATACCATGGGCAAGTGTATTCGGAAACCATGATGATGCTCCATTTGAGTGGCCATTGGAGTGGTTCTCTGCGCCCGGAATTCCTCCAATTCGCTGCCCTCCGCCCTGTTCTTCGTATTCAGGAGAACAAGAATGTAGCTTCAAAGGCACAGGACGATTGGAGCTGATGAAAAATGAGATCAAGCATAATGCGTCCTTGTCTGTTAATGGTCCTACAGATCTTTGGCCAAGTATATCCAACTATGTCCTCCAAATCTCATCATCAGATGATCCAAAATCACCAATGGCTTTCCTTTACTTCCTTGATTCTGGTGGTGGTTCCTATCCGGAAGTCATAAGTAGTGGCCAAGCAGAATGGTTCCGGCAGAAAGCTGAAGAGATTAATCCTAAAGCAAGGGTGCCTGAGATTATTTTCTGGCATATACCAAGTAAAGCCTATAAAGTGGTGGCTCCCAAGTCGGGAATACCCAAACCTTGTGTGGGTTCGATTAACAAGGAAAACGTTGCTGCTCAGGAAACTGAAATGGGTATCATGGAGCTGCTTGGGGAAAGAACTTCTGTCAAGGCAATATTCGTTGGACACAACCATGGATTGGACTGGTGCTGCCCACACAAGAAACTATGGCTATGCTATGCTAGGCACACTGGCTATGGCGGCTATGGAAATTGGCCTAGAGGATCCAGAATTGTGGAAATCGCGCATACGCCCTTTTCTCTTCGATCTTGGATAAGGATGGAGGATGGCCAAGTGCACAGTGAATGTTTGATCTGTCCCACTACAAAGAAAATCACAACTCAGCAGTTTACTGAGTTAATCAAAGTGGTTGATCTGCCCCACTACAAAGAAAATCACAACTCAGCAGTTTACATAGAGTCAGCTCGTGCTCCAGAAAATTCTGGAGTTGCTGATACAAAGCAATTTATTACTGAAATGGATGTTTTGGTGGTTGGGAAATTTATTAAGATGCTGACTCTGGCGAACACTCTTCGGGTGAATTCGTCGTTGTCTTCGATAGAAGAAGTTGGGGCATGTCCCTCAACTAACGGCAGCAGTTATGAGCTCCATGTCCGAGCCTTGGCTGCTTTAATAGAAGCTCACAAGGTAAAAACAGAATTTGATGAAAAAGCTAAAGAAGAAACCCCTTGGAGAGTTTGGCAGCAATATCACGTATATTTGCTTTTGGGAGCTTGCAAAATCAGAGATACTGCTAAGCCATTCTTCATGGCAAAGTGGAACTGCTGGTTTGGATGGGGCGAAAGGTTCTTAACTTCTGAGTCAAAGGCAAAAAAGCCAAAGAAATGGAAATGGGGCCTGGGAAGGCTTAAGCTGAAACAGTATCCCACACTTGCAGAACCAAACAGAACACTAGATGAAGCAAGAGCGAAGCAGAGAAAGCATGCTTTGACTGTGGCTATTACAACAGCAGCAGCAGCAGAGGCTGCAGTTGCTGCCGCACAAGCTGCTGCTGAGGTTGTGAGGCTCACGGGTGCTTCTCGCTCGTATTCCTATCTGTGCAATGGAGACCGAAACTTGGCCGCCACTAAGATTCAAAGCGCATACCGTGCACATCTGGCTAGGAAAGCATTAAGAGCATTGAAGGGAGTTGTAAGACTGCAAGCTATAGTTCGCGGTCGAGCTGTGAGACGTCAAATGTTCAGCACTTCGAATAATTTGCCCTCCAAAGCAAAAGGGCAAGTGGAAATCCAGAAAAGAAGTAGTCATGCTGCATACGAAATCCACAAAAATGACAAGAGAAAGCAGTTTGCAAAGCAGAAAAAGAAGTTGGAAGACACGGAAATGAAGCCTGAATGCCATAGTCAAAGAACTTGGGATTGCAGCTTGCAGTCGAAAGAAGACTCTGAAGCCCTGCGGTCAAAAAAGCAGGAGGCTATTTTCAAAAAAGAGCGAATGAAGCAGTACTCGTTCTCACACCGGGAGAGAAAAACTTTCCACATGTTGGAAGAATCTATGCCCAATAAGGAATTTGGAGGAGAGCGCAGTCGGACTCTAGGACAATGGCTGGATAAAGAAAAACGTAAGGGGGATGTGTTTTATAAACAAGCTCGTCCTTCAAACTTGATCACGAGGGAATGGTATAATACGACACAAGTTAAACAGAAGAATGTGAAAGTAGAACATTTGCAAGAAGACAAATTAACTTCACAACTTTCATTCCCAAGGAAGTCATTTTCTCGTGTGAAGATAGGTTCATTTGGAGATGAAAGTTCCATGCCAAATTCTCCAGTTTCTCTCACTTACATGGCTAAAAATGAATTAGTGAAAGCAAAGGCAAGGTCTATGAGCACGCCGAGGCAAAGAACAGGATTTCTGGATACATGCTCCGATCAGAAAGATTGTCACAAGGAAGGCATATCTATCTGGTCTTCTAATTATGGTGCAACTACGAGTGCCAATGGAAAAAAATGA 3243 0.4468 MELCRWWIAIPITLRVIGNLLSSLLDRHNFNHIIQRRKRVVGDEGRGSPSVAAGDTPFCFRSSTQALPRSDFGKDEILTERARETFVQKLMSNVFRLLEFVLLSCTISIFSMELKKDIFVHLVGYLKPYPVALSSSLVGSRIMETSKSQWTLQPVLLFSLLFTVVGSSHHRRVPSSIRLLPPSTPERHLHIAAPGAPFKIALFADLHFGEASSTDWGPLQDVNSIKVMNRVLDDETPDFVIYLGDVITANNIMIKNATLYWDEAISPARNRGIPWASVFGNHDDAPFEWPLEWFSAPGIPPIRCPPPCSSYSGEQECSFKGTGRLELMKNEIKHNASLSVNGPTDLWPSISNYVLQISSSDDPKSPMAFLYFLDSGGGSYPEVISSGQAEWFRQKAEEINPKARVPEIIFWHIPSKAYKVVAPKSGIPKPCVGSINKENVAAQETEMGIMELLGERTSVKAIFVGHNHGLDWCCPHKKLWLCYARHTGYGGYGNWPRGSRIVEIAHTPFSLRSWIRMEDGQVHSECLICPTTKKITTQQFTELIKVVDLPHYKENHNSAVYIESARAPENSGVADTKQFITEMDVLVVGKFIKMLTLANTLRVNSSLSSIEEVGACPSTNGSSYELHVRALAALIEAHKVKTEFDEKAKEETPWRVWQQYHVYLLLGACKIRDTAKPFFMAKWNCWFGWGERFLTSESKAKKPKKWKWGLGRLKLKQYPTLAEPNRTLDEARAKQRKHALTVAITTAAAAEAAVAAAQAAAEVVRLTGASRSYSYLCNGDRNLAATKIQSAYRAHLARKALRALKGVVRLQAIVRGRAVRRQMFSTSNNLPSKAKGQVEIQKRSSHAAYEIHKNDKRKQFAKQKKKLEDTEMKPECHSQRTWDCSLQSKEDSEALRSKKQEAIFKKERMKQYSFSHRERKTFHMLEESMPNKEFGGERSRTLGQWLDKEKRKGDVFYKQARPSNLITREWYNTTQVKQKNVKVEHLQEDKLTSQLSFPRKSFSRVKIGSFGDESSMPNSPVSLTYMAKNELVKAKARSMSTPRQRTGFLDTCSDQKDCHKEGISIWSSNYGATTSANGKK 1080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1388 1080 Pfam IQ calmodulin-binding motif 784 802 IPR000048 GO:0005515
Glsi11g1388 1080 Coils Coil 853 873 - -
Glsi11g1388 1080 FunFam Predicted protein 307 509 - -
Glsi11g1388 1080 Pfam Protein of unknown function (DUF4005) 1016 1056 IPR025064 -
Glsi11g1388 1080 ProSiteProfiles IQ motif profile. 805 832 IPR000048 GO:0005515
Glsi11g1388 1080 Pfam Calcineurin-like phosphoesterase 198 468 IPR004843 GO:0016787
Glsi11g1388 1080 Gene3D - 780 828 - -
Glsi11g1388 1080 SMART iq_5 780 802 IPR000048 GO:0005515
Glsi11g1388 1080 MobiDBLite consensus disorder prediction 853 874 - -
Glsi11g1388 1080 CDD MPP_Dcr2 198 493 - -
Glsi11g1388 1080 PANTHER PHOSPHATASE DCR2-RELATED-RELATED 157 526 - -
Glsi11g1388 1080 ProSiteProfiles IQ motif profile. 781 809 IPR000048 GO:0005515
Glsi11g1388 1080 SUPERFAMILY Metallo-dependent phosphatases 197 511 IPR029052 -
Glsi11g1388 1080 Gene3D - 197 516 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1388 Glsi-ChrGlsi11 8724519 8735851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1388 680 1080 IQD Protein Family AT5G03960 41.769 1.78e-57 202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g1388 11 8724519 8735851 Glsi11g1388 11 8724519 8735851 ECH